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The map label for this gene is yphA [H]

Identifier: 152971406

GI number: 152971406

Start: 3159564

End: 3159986

Strand: Direct

Name: yphA [H]

Synonym: KPN_02875

Alternate gene names: 152971406

Gene position: 3159564-3159986 (Clockwise)

Preceding gene: 152971405

Following gene: 152971408

Centisome position: 59.44

GC content: 57.21

Gene sequence:

>423_bases
ATGAACACACTCCGCTATTTTGATTTTGGCGCTTCCCGCTCTCTATTGCTGCTTATCGCCCGCATCGCCGTGGTGATTCT
GTTTATTCTTTTTGGCTACCCCAAACTGCTGGGCTTTGACGGTACGGTGCAGTACATGGCCGCCTCCGGCGCGCCGATGC
CGACCCTGGCGGCGATTATCGCCGTCATTATGGAAGTGCCTGCCGCGATTCTGATTGTGCTCGGCTTTTTCACCCGCCCG
CTGGCGGTCATCTTTATTTTCTACACCCTGGGCACGGCGGTGATTGGCCATCACTACTGGGATATGACTGGCGATGCGGT
ATTGCCGAACATGATTAACTTCTGGAAAAACGTCAGCATCGCCGGCGCTTTCCTGCTGCTGGCGGTAACCGGCCCCGGGG
CGATCTCCCTCGACCGCCGCTAA

Upstream 100 bases:

>100_bases
GAGGAGCAATTGCAGACGCTGGTTTAGTCATAAACGAACGTGGCGGAGCGCAAATTTGTGTATTACGTTTAAATCACACG
TCTCTCATAACGAGCTGATT

Downstream 100 bases:

>100_bases
TCTCCAGACGCAAAAAAGGCCGCATACGCGGCCTTTTTGATGTCAACGCTAACGCTTACGCATATACCGGGAAGCGGGCG
CAGATATCCAGCACTTTACC

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYMAASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRP
LAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLLLAVTGPGAISLDRR

Sequences:

>Translated_140_residues
MNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYMAASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRP
LAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLLLAVTGPGAISLDRR
>Mature_140_residues
MNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYMAASGAPMPTLAAIIAVIMEVPAAILIVLGFFTRP
LAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSIAGAFLLLAVTGPGAISLDRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=140, Percent_Identity=88.5714285714286, Blast_Score=253, Evalue=4e-69,
Organism=Escherichia coli, GI87082210, Length=123, Percent_Identity=43.0894308943089, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15195; Mature: 15195

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYMAASGAPMPTLAAII
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCHHHHHHHH
AVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
AGAFLLLAVTGPGAISLDRR
HHHHHHEEECCCCCEECCCC
>Mature Secondary Structure
MNTLRYFDFGASRSLLLLIARIAVVILFILFGYPKLLGFDGTVQYMAASGAPMPTLAAII
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCCCCHHHHHHHH
AVIMEVPAAILIVLGFFTRPLAVIFIFYTLGTAVIGHHYWDMTGDAVLPNMINFWKNVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHH
AGAFLLLAVTGPGAISLDRR
HHHHHHEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]