Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 152971121

GI number: 152971121

Start: 2833204

End: 2833602

Strand: Direct

Name: yohJ [C]

Synonym: KPN_02582

Alternate gene names: 152971121

Gene position: 2833204-2833602 (Clockwise)

Preceding gene: 152971114

Following gene: 152971122

Centisome position: 53.3

GC content: 55.39

Gene sequence:

>399_bases
ATGAGTAAATCGCTGACTATTATCTGGCAGTACCTGCGGGCTTTCGTCCTGATTTACGCCTGCCTGTACGCCGGAATTTT
TATCGCCGGGCTGCTGCCTATCACTATCCCCGGCAGCATCATCGGCATGCTGATCCTCTTCGTGCTGCTGGCGCTGCAAA
TTATGCCGCCGCAATGGGTCAACCCCGGCTGCAATATCCTGATCCGCTATATGGCGCTGCTGTTCGTGCCGATCGGCGTT
GGGGTGATGCAGTACTGGGATCTGCTGCGCGCCCAGCTGGGGCCTGTCGTTATCTCCTGCGCCATCAGTACGCTGGTGGT
GTTTGTAGTGGTGAGCTGGAGCTCCCATTTGGTGCATGGCGAACGTAAAGTGATTGGCCAAAAAGGAAAAGAAGAATGA

Upstream 100 bases:

>100_bases
CCGTAAGCTATCAGCGCTATGCATAGAATTCATGATGTGATCGGTAGCACATTTTAGGGATTAATTGTATGATGAATGCA
CTTCATCAAGGGTTATTACC

Downstream 100 bases:

>100_bases
TGCATGAAATCTGGTGGTCGCTACCGCTAACCCTGATCGTCTTTTTTCTCGCCCGCAAACTGGCGGCCCGCTTTAAGTTC
CCGCTGCTCAACCCGCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILIRYMALLFVPIGV
GVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE

Sequences:

>Translated_132_residues
MSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILIRYMALLFVPIGV
GVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE
>Mature_131_residues
SKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWVNPGCNILIRYMALLFVPIGVG
VMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHGERKVIGQKGKEE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=132, Percent_Identity=87.1212121212121, Blast_Score=235, Evalue=6e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14628; Mature: 14497

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
NPGCNILIRYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVIGQKGKEE
HHHHHCCCCCCC
>Mature Secondary Structure 
SKSLTIIWQYLRAFVLIYACLYAGIFIAGLLPITIPGSIIGMLILFVLLALQIMPPQWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC
NPGCNILIRYMALLFVPIGVGVMQYWDLLRAQLGPVVISCAISTLVVFVVVSWSSHLVHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVIGQKGKEE
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA