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The map label for this gene is ydgT [H]

Identifier: 152970514

GI number: 152970514

Start: 2160310

End: 2160537

Strand: Direct

Name: ydgT [H]

Synonym: KPN_01962

Alternate gene names: 152970514

Gene position: 2160310-2160537 (Clockwise)

Preceding gene: 152970513

Following gene: 152970515

Centisome position: 40.64

GC content: 46.93

Gene sequence:

>228_bases
ATGGATACGAAAATGACCGTGCTGGACTACTTATTAAAATTTCGCAAAATCAGTTCGCTGGAAAGCCTTGAAAAACTATT
TGATCACCTTAACTACTCCCTGACTGACACCCAGGAGATCGTGAATATGTATCGCGCCGCCGATCATCGTCGCGCAGAGC
TGGTCTCCGGTGGTAAATTGTTCGATGTGGGCCAGGTTCCTAAATCCGTTTGGCGATTCGTGCAGTAA

Upstream 100 bases:

>100_bases
AACCTGATTCATTCCACGCGGCCCCAGCAGAAGGCGCCGTTGGTTGAGAGTAGGTTTAGTGAATGCTGATAATATTCAAC
GCAATAATTCCGATTATAAA

Downstream 100 bases:

>100_bases
GGCTGTCATCCTTCACGCCAGTTGCTTATACTTCCCGGCCTGATTTTATTCACTGGCGTTGAATAGGGGAGAAACATGAC
GTCTCAATCTGCAGAGCGCA

Product: oriC-binding nucleoid-associated protein

Products: NA

Alternate protein names: H-NS/stpA-binding protein 2 [H]

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MDTKMTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTQEIVNMYRAADHRRAELVSGGKLFDVGQVPKSVWRFVQ

Sequences:

>Translated_75_residues
MDTKMTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTQEIVNMYRAADHRRAELVSGGKLFDVGQVPKSVWRFVQ
>Mature_75_residues
MDTKMTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTQEIVNMYRAADHRRAELVSGGKLFDVGQVPKSVWRFVQ

Specific function: The complex formed with H-NS binds to the specific 26-bp cnb site in the origin of replication oriC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hha/ymoA/cnu family [H]

Homologues:

Organism=Escherichia coli, GI1787912, Length=71, Percent_Identity=85.9154929577465, Blast_Score=133, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007985 [H]

Pfam domain/function: PF05321 HHA [H]

EC number: NA

Molecular weight: Translated: 8780; Mature: 8780

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKMTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTQEIVNMYRAADHRRAELVSGGKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
FDVGQVPKSVWRFVQ
CCHHHHHHHHHHHCC
>Mature Secondary Structure
MDTKMTVLDYLLKFRKISSLESLEKLFDHLNYSLTDTQEIVNMYRAADHRRAELVSGGKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
FDVGQVPKSVWRFVQ
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA