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The map label for this gene is yddH [H]

Identifier: 152970440

GI number: 152970440

Start: 2082518

End: 2083099

Strand: Direct

Name: yddH [H]

Synonym: KPN_01888

Alternate gene names: 152970440

Gene position: 2082518-2083099 (Clockwise)

Preceding gene: 152970435

Following gene: 152970442

Centisome position: 39.18

GC content: 63.75

Gene sequence:

>582_bases
ATGAGCCGCTTTCGCCACGTTGAACTGCAGTACGCCAGCCGCCTGCTCAACCACGGCCCAACCATTTTGATCACCAGCTA
CGATGCCCCGTCCGACCGGCGCAACGTAATGGCCGCCGCCTGGTCAATGCCGGTGGAATTCGCCCCGCCGCGGGTGGCTA
TCGTGGTGGATAAAAGCACCTGGACGCGGGAGATCATCGAGCGCAATGGCACCTTCGGCATTGTGGTTCCCGGCGTCGCC
GCCGCCAGCTGGACCTACGCCGTCGGCAGCGTCAGCGGCCGCGATGAGGACAAATTCAATGCCTGGGGGATCCCGGTAGT
AACCGGTCCGGAGCTGGGGCTGCCGCTGATCGAGGAGAAATGTCTGGCATGGATGGAGTGCCGGTTGCTGCCGGCGACGG
CGGCCCAGACCCAGTACGACACCCTGTTCGGGGAGGTGGTCTCTGCCGCCGCCGATGAGCGCGCGTTCGTCACCGGACGC
TGGCAATTCGACGACGATAAGCTCAATACCCTGCATCATCTGGGCACCGGCAATTTTGTCGCCAGCGGCCGTCATGTGCG
GGCAAACTCCCTCGACGAATAA

Upstream 100 bases:

>100_bases
AGTGCTGGCGACTATAGTCAGACGAGATGACGTATTGATTACATTTTCATTGCGGCTTAACGTGTTACCTGCCAACCGAC
CCATTATTCAAGGAACGCCT

Downstream 100 bases:

>100_bases
GCGTGACTTGCCGCGGGCGGCCGGTTTTTCCCCTGCCCGGCCTGCGGCCCCCTTTTAACCCGGTGGGCGGCGGCGATCGG
CGCTGGGGGTCAGGCCAAAT

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKSTWTREIIERNGTFGIVVPGVA
AASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGR
WQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE

Sequences:

>Translated_193_residues
MSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKSTWTREIIERNGTFGIVVPGVA
AASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGR
WQFDDDKLNTLHHLGTGNFVASGRHVRANSLDE
>Mature_192_residues
SRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKSTWTREIIERNGTFGIVVPGVAA
ASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEKCLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGRW
QFDDDKLNTLHHLGTGNFVASGRHVRANSLDE

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=188, Percent_Identity=80.3191489361702, Blast_Score=320, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21288; Mature: 21157

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKST
CCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHEEEHHHCCCCEECCCEEEEEEECCH
WTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEK
HHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH
CLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFV
HHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCEE
ASGRHVRANSLDE
ECCCEEECCCCCC
>Mature Secondary Structure 
SRFRHVELQYASRLLNHGPTILITSYDAPSDRRNVMAAAWSMPVEFAPPRVAIVVDKST
CCCEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHEEEHHHCCCCEECCCEEEEEEECCH
WTREIIERNGTFGIVVPGVAAASWTYAVGSVSGRDEDKFNAWGIPVVTGPELGLPLIEEK
HHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH
CLAWMECRLLPATAAQTQYDTLFGEVVSAAADERAFVTGRWQFDDDKLNTLHHLGTGNFV
HHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCCCCCEE
ASGRHVRANSLDE
ECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]