| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is 152970442
Identifier: 152970442
GI number: 152970442
Start: 2084183
End: 2085751
Strand: Direct
Name: 152970442
Synonym: KPN_01890
Alternate gene names: NA
Gene position: 2084183-2085751 (Clockwise)
Preceding gene: 152970440
Following gene: 152970443
Centisome position: 39.21
GC content: 61.12
Gene sequence:
>1569_bases ATGTCACAAGCAATTCAATACAATTCCAGCGTGGCGATGATCCGTCATCCGCGCTTTTTACAGCGTGCGGCCGACCTGAC GCCCGCGCTGCAACGCCTGCGCCAGACGCCGCAGGCCATCGTCGAGGCCGTCGCTGAACCAGGAGCGCTGAACGGCTGGC GGGGGAATACCGTCCGCACGCCGGAACAGTTTTATCAGCAACCGCTCAACGTCGGCGACAGCATCATTATTGATTTTGGC AGCCATTTTGTTGGCTACCTGCAGTTCAGCTGCCGCAGCGTCGGCAGCCCGCCCGATGCCCCGGCACATCTGCACTTCAC CTTCGGCGAGACGCTGAGCGAAGTCTGTGAGCCGTTCAGCGAATACCATGGATGGCTGAGCAGCAGCTGGTTGCAGCAGC AGGATCTGTGGCTTGACGTCCTGCCCGCCCGGGTCGCTCTGCCACGTCGCTATTGCCTGCGCTACCTGAAGGTGGAGGTC AAAGCGCTGTCGCGCAAGTTCCGTCTGCAGTTCGATGAGATCGCTCTGGAAACCGTCACCTCTGCCGGCAGCCCGCACCC GGCGGTCATCGCCGATCCGCAGTTGAAGGCCATTGATGACGTTGCCGTTCGTACCCTGAAAAACTGCATGCAGGAGGTGT TTGAAGATGGGCCGAAACGCGACCGTCGGCTGTGGCTGGGCGACCTGCGCCTGCAGGCGCAGGTGAATGACGTGACCTTC GGCCACCACGATCTGGTCCGCCGCTGCCTGTATCTCTTTGCCGGCCATACCCGGGAAGATGGCATGGTTTCCGCCAATGT CTTTGTTCAGCCAGAGGTACGCGCCGATGACACCTTTCTGTTTGATTACTCATTGTTTTTTGTCGACGTGCTTTATAACT ACCTGCAAAGCACCGGCGACACGGAAACCGTCGGTGAGCTGTGGCCCACGGCGCGGCGGCAAATCGAGCTGGCGCTGACC CGCTGCGATTCTCAGGGGCTGGTGCGCGACAGCGATGACTGGTGGGTATTTATCGACTGGCAGGCGGAGCTGAATAAACA GGCCTCGGCGCAGGGGGTGCTCATCTACTGTCTGCAGCGCGCCCTCTGGCTGGCGCAGCGTTTTGAACCGCAGCGGGTAC CTGACTACACTGCCACGCTCTGGCAGCTGAAGGAGGCCGCCCTCCACCATCTGTGGGACAACGAGCGGCAGGTGTTTATC AGCGGCGCCGTGCGTCAGGTCTCATGGGCGTCGCAGATCTGGCTGGTGCTGGCGGAAGTTGGCACCGCCGGGCAGCGTCA GGGGCTGATGCGCCGCCTGCAGCAGCAGCCGCCCGCCATTGCCATGAACACCCCGTACCTGCGTCATCATCACATTGTTG CCCTGCTACAGTCCGGCCTGCGCGAGGAGGCGGTGGCGGAGATCAAAGCCTACTGGGGGGCGATGGTCGCCTACGGCGCC GACACCTTCTGGGAAATTTTCGACCCCCAACATCCTGACTTTTCCCCGTATGGCAGTAAGCTTATCAACAGTTACTGCCA TGCGTGGAGCTGTACCCCGGCCTGGTTTATTCGCCAGTACGGACTTTAA
Upstream 100 bases:
>100_bases ATTATTCCTGCCATTTTCACTGACGGTTTGGCATTGCCAGAGTGGTAGCCGCGCCGGACGACGGCCTATGCTGCGCCTAA CCTAACGGAGAGGACGCAGT
Downstream 100 bases:
>100_bases CAACAACGATAAGCGAGTGATTTATGGCAGAAACAACGTTTACCCTGTGGCGGCAGCGCCTTGGCTATGGCATTGCCGAT CTCTCCTGCAACCTTGTGTG
Product: putative sugar hydrolase
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Alfa-L-Rhamnosidase In L-Rhamnose Subsystem
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MSQAIQYNSSVAMIRHPRFLQRAADLTPALQRLRQTPQAIVEAVAEPGALNGWRGNTVRTPEQFYQQPLNVGDSIIIDFG SHFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFSEYHGWLSSSWLQQQDLWLDVLPARVALPRRYCLRYLKVEV KALSRKFRLQFDEIALETVTSAGSPHPAVIADPQLKAIDDVAVRTLKNCMQEVFEDGPKRDRRLWLGDLRLQAQVNDVTF GHHDLVRRCLYLFAGHTREDGMVSANVFVQPEVRADDTFLFDYSLFFVDVLYNYLQSTGDTETVGELWPTARRQIELALT RCDSQGLVRDSDDWWVFIDWQAELNKQASAQGVLIYCLQRALWLAQRFEPQRVPDYTATLWQLKEAALHHLWDNERQVFI SGAVRQVSWASQIWLVLAEVGTAGQRQGLMRRLQQQPPAIAMNTPYLRHHHIVALLQSGLREEAVAEIKAYWGAMVAYGA DTFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL
Sequences:
>Translated_522_residues MSQAIQYNSSVAMIRHPRFLQRAADLTPALQRLRQTPQAIVEAVAEPGALNGWRGNTVRTPEQFYQQPLNVGDSIIIDFG SHFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFSEYHGWLSSSWLQQQDLWLDVLPARVALPRRYCLRYLKVEV KALSRKFRLQFDEIALETVTSAGSPHPAVIADPQLKAIDDVAVRTLKNCMQEVFEDGPKRDRRLWLGDLRLQAQVNDVTF GHHDLVRRCLYLFAGHTREDGMVSANVFVQPEVRADDTFLFDYSLFFVDVLYNYLQSTGDTETVGELWPTARRQIELALT RCDSQGLVRDSDDWWVFIDWQAELNKQASAQGVLIYCLQRALWLAQRFEPQRVPDYTATLWQLKEAALHHLWDNERQVFI SGAVRQVSWASQIWLVLAEVGTAGQRQGLMRRLQQQPPAIAMNTPYLRHHHIVALLQSGLREEAVAEIKAYWGAMVAYGA DTFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL >Mature_521_residues SQAIQYNSSVAMIRHPRFLQRAADLTPALQRLRQTPQAIVEAVAEPGALNGWRGNTVRTPEQFYQQPLNVGDSIIIDFGS HFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFSEYHGWLSSSWLQQQDLWLDVLPARVALPRRYCLRYLKVEVK ALSRKFRLQFDEIALETVTSAGSPHPAVIADPQLKAIDDVAVRTLKNCMQEVFEDGPKRDRRLWLGDLRLQAQVNDVTFG HHDLVRRCLYLFAGHTREDGMVSANVFVQPEVRADDTFLFDYSLFFVDVLYNYLQSTGDTETVGELWPTARRQIELALTR CDSQGLVRDSDDWWVFIDWQAELNKQASAQGVLIYCLQRALWLAQRFEPQRVPDYTATLWQLKEAALHHLWDNERQVFIS GAVRQVSWASQIWLVLAEVGTAGQRQGLMRRLQQQPPAIAMNTPYLRHHHIVALLQSGLREEAVAEIKAYWGAMVAYGAD TFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59770; Mature: 59639
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAIQYNSSVAMIRHPRFLQRAADLTPALQRLRQTPQAIVEAVAEPGALNGWRGNTVRT CCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCC PEQFYQQPLNVGDSIIIDFGSHFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFS HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH EYHGWLSSSWLQQQDLWLDVLPARVALPRRYCLRYLKVEVKALSRKFRLQFDEIALETVT HHHCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SAGSPHPAVIADPQLKAIDDVAVRTLKNCMQEVFEDGPKRDRRLWLGDLRLQAQVNDVTF CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCC GHHDLVRRCLYLFAGHTREDGMVSANVFVQPEVRADDTFLFDYSLFFVDVLYNYLQSTGD CHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC TETVGELWPTARRQIELALTRCDSQGLVRDSDDWWVFIDWQAELNKQASAQGVLIYCLQR CHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEHHHCCCCCCCCHHHHHHHHH ALWLAQRFEPQRVPDYTATLWQLKEAALHHLWDNERQVFISGAVRQVSWASQIWLVLAEV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH GTAGQRQGLMRRLQQQPPAIAMNTPYLRHHHIVALLQSGLREEAVAEIKAYWGAMVAYGA CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC DTFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL CHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure SQAIQYNSSVAMIRHPRFLQRAADLTPALQRLRQTPQAIVEAVAEPGALNGWRGNTVRT CCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCC PEQFYQQPLNVGDSIIIDFGSHFVGYLQFSCRSVGSPPDAPAHLHFTFGETLSEVCEPFS HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHH EYHGWLSSSWLQQQDLWLDVLPARVALPRRYCLRYLKVEVKALSRKFRLQFDEIALETVT HHHCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SAGSPHPAVIADPQLKAIDDVAVRTLKNCMQEVFEDGPKRDRRLWLGDLRLQAQVNDVTF CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCC GHHDLVRRCLYLFAGHTREDGMVSANVFVQPEVRADDTFLFDYSLFFVDVLYNYLQSTGD CHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCC TETVGELWPTARRQIELALTRCDSQGLVRDSDDWWVFIDWQAELNKQASAQGVLIYCLQR CHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEHHHCCCCCCCCHHHHHHHHH ALWLAQRFEPQRVPDYTATLWQLKEAALHHLWDNERQVFISGAVRQVSWASQIWLVLAEV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH GTAGQRQGLMRRLQQQPPAIAMNTPYLRHHHIVALLQSGLREEAVAEIKAYWGAMVAYGA CCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC DTFWEIFDPQHPDFSPYGSKLINSYCHAWSCTPAWFIRQYGL CHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA