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The map label for this gene is ycdC [C]

Identifier: 152970304

GI number: 152970304

Start: 1933365

End: 1933943

Strand: Direct

Name: ycdC [C]

Synonym: KPN_01752

Alternate gene names: 152970304

Gene position: 1933365-1933943 (Clockwise)

Preceding gene: 152970302

Following gene: 152970306

Centisome position: 36.37

GC content: 56.82

Gene sequence:

>579_bases
ATGAAGCCAAAACAAGCGGACATTCTCCGCCACGCCAGCACGCTGTTTAATCGCGAAGGATATCAGTCGCCCAGCATCGA
GCGGATTGCTGAACATGCTGGCATCTCCAAAATGACCTTCTACCGCTATTACGCCGATAAAGAGGCGCTCATTCTGGCTA
TCCTCAAGCAGAAAGAGAGCGAATTTATGCAGGATTTGGCGCAGATCACCGCGGATAAAGCCAGCGCGCGGGAAAAGCTG
TTCGCCGTGTTCGACTACTACCATCGCTGGTTTACCTGCGAAACGTTCCACGGCTGCATGTTTACCCGCGCGCTGTTTGA
ATATGGCGCGTCATCGCCGGCGATCCGGGAGCAATGCTCCCGATTTAAGTCGCTCCTCTGGCAGTTCTTCCGCGATATCC
TCCTGCAGGTGTTAAAACCAGAGCCTGCCGAGCGGGTCGCCATGATGATGGTGATGCTCATCGATGGCGCTATCGCCGCC
CAGCAGGCCGAGTCCGCCGAATGCCGGGAGATCCCGCCAGGGATGACCGCCTGGAGCGCGGCCAAAGCGCTTATTTACTC
AGAAGGCGGTACGCTGTGA

Upstream 100 bases:

>100_bases
TTTTGCCCGTCTGGCGGCAAGATCCGGCATAATGCACCGCTGTCGCAGGACGGCCGTGTCACCGGCAATCGTGACAGCGA
ACCATTCGACAGGAAAACGC

Downstream 100 bases:

>100_bases
GATGATAAGCTGCCGCCCAGCGACTGCAGGGCCGCCAGCAGACCATCATAGTAATCGTTGCAGGTTTGCAGACGCAGCGC
GGCGCCAAAGAAGACCTCCT

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Regulatory Protein TetR; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKPKQADILRHASTLFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKESEFMQDLAQITADKASAREKL
FAVFDYYHRWFTCETFHGCMFTRALFEYGASSPAIREQCSRFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAA
QQAESAECREIPPGMTAWSAAKALIYSEGGTL

Sequences:

>Translated_192_residues
MKPKQADILRHASTLFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKESEFMQDLAQITADKASAREKL
FAVFDYYHRWFTCETFHGCMFTRALFEYGASSPAIREQCSRFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAA
QQAESAECREIPPGMTAWSAAKALIYSEGGTL
>Mature_192_residues
MKPKQADILRHASTLFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKESEFMQDLAQITADKASAREKL
FAVFDYYHRWFTCETFHGCMFTRALFEYGASSPAIREQCSRFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAA
QQAESAECREIPPGMTAWSAAKALIYSEGGTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21945; Mature: 21945

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKQADILRHASTLFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKES
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
EFMQDLAQITADKASAREKLFAVFDYYHRWFTCETFHGCMFTRALFEYGASSPAIREQCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAAQQAESAECREIPPGMTAWSA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH
AKALIYSEGGTL
HHHHHHCCCCCC
>Mature Secondary Structure
MKPKQADILRHASTLFNREGYQSPSIERIAEHAGISKMTFYRYYADKEALILAILKQKES
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH
EFMQDLAQITADKASAREKLFAVFDYYHRWFTCETFHGCMFTRALFEYGASSPAIREQCS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFKSLLWQFFRDILLQVLKPEPAERVAMMMVMLIDGAIAAQQAESAECREIPPGMTAWSA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH
AKALIYSEGGTL
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA