Click here to switch to the map view.

The map label for this gene is pspC [H]

Identifier: 152969853

GI number: 152969853

Start: 1458842

End: 1459201

Strand: Direct

Name: pspC [H]

Synonym: KPN_01299

Alternate gene names: 152969853

Gene position: 1458842-1459201 (Clockwise)

Preceding gene: 152969852

Following gene: 152969854

Centisome position: 27.45

GC content: 56.94

Gene sequence:

>360_bases
ATGGCCGGGCTGGATCTGAATAAAAAACTGTGGCGTATCCCGCAGCGCGGGATGGTAAAGGGCGTCTGCGCGGGCATTGC
TCAGCATCTTGATGTCCCGGTGAAGCTGGTGCGTCTGATTACCGTGCTGGCGATGATTTTCGGCCTCTTTTTCTTTGTCC
TGGTGGCCTACATCATTTTGACTTTTGCTCTGGATCCGATACCGGACAGCGAGCTGTACGGTCATAAAGCGCCGAGCAAT
GGCGATCTGCTGGCCGCCGTGGATGCCGAACTGGCCTCCGGTGAACAGCGTCTGCGTGAAATGGAGCGGTATGTGACCTC
CGACACCTTTACGCTGCGCAGCCGCTTTCGCCAGCTGTAA

Upstream 100 bases:

>100_bases
GGCTGCTGCAGTTGACCGATGACGCGAAGCGGATGCGCGAACGCATTCAGGCGCTGGAAGCGATCCTGGACGCCGAACAT
CCGAACTGGAGGGACAAATA

Downstream 100 bases:

>100_bases
ACCCTGTTTCTAACGAATGAGGCAACGCATGAATAGCAAATGGCAACGCGCCGGGCAGCAGGTGAAGCCCGGTCTGAAAA
TCGTCGGTAAGCTGGCGCTG

Product: DNA-binding transcriptional activator PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MAGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIILTFALDPIPDSELYGHKAPSN
GDLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL

Sequences:

>Translated_119_residues
MAGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIILTFALDPIPDSELYGHKAPSN
GDLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL
>Mature_118_residues
AGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIILTFALDPIPDSELYGHKAPSNG
DLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=119, Percent_Identity=71.4285714285714, Blast_Score=182, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 13350; Mature: 13219

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIIL
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFALDPIPDSELYGHKAPSNGDLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL
HHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
AGLDLNKKLWRIPQRGMVKGVCAGIAQHLDVPVKLVRLITVLAMIFGLFFFVLVAYIIL
CCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFALDPIPDSELYGHKAPSNGDLLAAVDAELASGEQRLREMERYVTSDTFTLRSRFRQL
HHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]