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The map label for this gene is rbsC [H]

Identifier: 152969194

GI number: 152969194

Start: 705459

End: 706382

Strand: Direct

Name: rbsC [H]

Synonym: KPN_00623

Alternate gene names: 152969194

Gene position: 705459-706382 (Clockwise)

Preceding gene: 152969193

Following gene: 152969195

Centisome position: 13.27

GC content: 62.23

Gene sequence:

>924_bases
ATGTTGCTGACCGTGGTGCTGCTGGTGGCGGTCTTTGGCCTCGCCTCGGACAACTTCCTTGACCCGTTCAACATCATCAA
CATTCTGCGCTCGATTGCCATCGTGACGGTGATTGCCATTGGGGTGTCGATTTCCCTCACCATCGGCGGCTTCGATCTGT
CCGTCGGATCGACGGCATCGCTGGCTAACGCGCTGGTGATTTCCCTGTTTGTCTGGCATGGCCTGGGGACCACCGAAGCG
ATTCTGATAACCCTCGCGCTCTGCACCCTGGTGGGGCTGTTTAACGCCTTTCTGATCGTGGTGCTGCGCATTCCTGACAT
GCTCGCCACCCTGGCCAGCCTGTTTGTGATTCAGGGCGTGGCAATGACATACAGCTACGGTGGGTCGATTACCGAAAACA
TGGTGCTGCCGAGCGGCGAGATGGCGGAGGGTACTATCCCGGCGGCCTTTGGCGCGCTGGGGCAGGTGCCGACCATCGTC
ATTATCATGCTGGTGGTGACGCTGGTCGCCCAGCTGGCGCTGTCGTTCACTACCCACGGACGGCGGATGTACGCCATCGG
CGGCAACCCGGAGGCCGCGCGGCTCTCCGGCCTGCGGATCACGCGTTACAAAGTCGCAGCATACGTGATTGCCTCGCTGC
TGGCCGGGCTGGGCGGCATTCTGCTGGCCTCGCGTATCGGATCCTCGCAGGTCAACGCCGGCGGCGGCTATCTGATGGAC
GCGGTGGCGGCGGCCTGGATCGGCTTTTCGCTGGCGGGCTCCGGTAAACCGAACGCCCTGGGGACGCTGGTGGGGGCGGT
GATCCTCGGCGTGCTCTCCAACGGGCTGGTGATGCTCTCGGTGCCGTATTACGCGATGGACATTATTAAAGGGTTGGTGC
TGGCTGGCGCGCTGGCACTGACCTATTTTCAGCGCCGTACTTAA

Upstream 100 bases:

>100_bases
ATTATTCAACCGGAGGAGCGGCAGCGTGAGCAAGGCCCTGGCAGTAAACGCGACGGTATCGGGCCGTCAGCGATTTTTTG
ATTTTCTCTATAAGTGGGGC

Downstream 100 bases:

>100_bases
CATTTTACAGGGTAAACCGCATGAAAAAGATCGCACTCTCTCTGATGACGCTGGGTCTGCTGCAGTCGACGGCGGCGCTG
GCCACTGCCCCGACGCCGGT

Product: putative ABC transporter, permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEA
ILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIV
IIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD
AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT

Sequences:

>Translated_307_residues
MLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEA
ILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIV
IIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD
AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT
>Mature_307_residues
MLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEA
ILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIV
IIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD
AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=302, Percent_Identity=35.4304635761589, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1789992, Length=361, Percent_Identity=27.4238227146814, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI145693152, Length=303, Percent_Identity=31.023102310231, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1788896, Length=301, Percent_Identity=27.906976744186, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787793, Length=296, Percent_Identity=30.4054054054054, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082395, Length=250, Percent_Identity=29.6, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790524, Length=291, Percent_Identity=26.4604810996564, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788471, Length=285, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787794, Length=295, Percent_Identity=28.4745762711864, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI145693214, Length=258, Percent_Identity=30.6201550387597, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 31649; Mature: 31649

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTAS
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEECCCCHHH
LANALVISLFVWHGLGTTEAILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIVIIMLVVTLVAQLALSFTTHG
HHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
RRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD
CEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALAL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHH
TYFQRRT
HHHHHCC
>Mature Secondary Structure
MLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTAS
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECEEECCCCHHH
LANALVISLFVWHGLGTTEAILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTYSYGGSITENMVLPSGEMAEGTIPAAFGALGQVPTIVIIMLVVTLVAQLALSFTTHG
HHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
RRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMD
CEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALAL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHH
TYFQRRT
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]