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The map label for this gene is rbsA [H]

Identifier: 152969193

GI number: 152969193

Start: 703885

End: 705387

Strand: Direct

Name: rbsA [H]

Synonym: KPN_00622

Alternate gene names: 152969193

Gene position: 703885-705387 (Clockwise)

Preceding gene: 152969188

Following gene: 152969194

Centisome position: 13.24

GC content: 62.74

Gene sequence:

>1503_bases
ATGAGCGCGAACCGCCTTGAGATGCATAACATTAGCCTGGCCTTCTCCGGCTTTCAGGCACTGAACAAGGTGGACTTTAC
CCTTCATGGCGGGTCGGTGCATGCCCTGACCGGGGCCAACGGCGCGGGTAAGTCGACGCTGATGGCCGTGCTGTGCGGGA
CGCATGCTCACTATCAGGGCGAGGTGACGATCAACGATCAGCCGGTCACCATTCGTTCGCCGCGGGATGCTAAACAGTTG
GGGATCCACCTGGTGCAGCAGGAGGTGGATGTGGCGCTGGTACCTGGCCTGAGCATTGCGGAAAACATCATGCTGGACAG
GCTGGCAGAGCCGGGCATGGCGTTTCGCTGGTCGCGGGTTCGGCAGCTGGCGCGCGAGGCGCTGGCGCAGCTGGACGTGG
CGCTGGACGTCAGGCGCTCCATTGACAGCTGCACGCTCGCCGAAAAACAGCAAATCCTGCTGGCTCGCGCTCTGTCGCAC
CATTGCCGCTTTTTGATCCTCGATGAGCCCACCGCGCCGCTGGATCAGCATGAAAGTGAGCGCCTGTTTTCGGTAGTACG
CCGTCTGCAGCAGCAGGGGATCGGGGTGGTGTTTATTTCGCATCGTATCCATGAACTGAAGGCGATCTGCGACACCCTGA
CGGTGCTGCGCGACGGGCGGCTAATTGAGAGCGGCCCGATGGCGCCGCTGAGCGGCGAACAGATCGTCGAAAAGATGCTG
GGCCACGAGCTGAGCGATATCTTCCCACCGCCGCGCCCGCCGCACGGCGAAGAGGTGCTGCTGCAGGTTGACGGTCTGCA
TGATGAGGCGTTGCTGCAGGATATTTCGCTGCGCCTGCGGAAGGGGGAAATTCTGGGTATCGCCGGGCTGGCCGGCGCGG
GCAAAACCGAGCTGTGCAAAGCGCTGTTCGGCGCCAGCAAAAGCCGGGTGCAGAGGGGCGAGCTGAACGGCCAGCCGTGG
CGACCGCGCGATCCGGCCGACTCGGTGGGGCGCGGCCTGGCGCTGGTCCCGGAGGAGCGACGCAAAGAGGGCATTTTCAT
TGAAGAGCCGATCGCGATGAACCTGGCGGTCAGCGCCGATAACAGCTTTTCGCGCTGGAGCCTGTTTGGCCATCGGCAGG
CCTGGCGCTGGGCGGAGGAGGTGATTGCCCGCCTCGGCGTGCGCGCTACCGGTCCCGGTCAGACGCTGCGCCGTCTTTCT
GGCGGCAACCAGCAGAAGGTGGCCATTGGCAAATGGCTGCGCGGTGATGCCAACGTTTTGATTTTTGACGAACCGACCAA
AGGGGTCGATGTGAAAGCGAAAACCGATCTGTTCATGCTGATCGATGGTCTGGCGCGGGAAGGCAAAGGGGTGATTTATG
CCTCGGGTGAATTCGCCGAGCTGGTCGGTTTATGCGACCGCATCTGCGTACTGTGGGACGGACGGATCGTAGCGGAGATC
CCCGGCGCGGAAGCCCGGGAAGAGACACTGCTTTATTATTCAACCGGAGGAGCGGCAGCGTGA

Upstream 100 bases:

>100_bases
ATTATTTCGTTGTATCTTATGCTTTTTACGCAGTTGTCAGCCAGCGGCGGCTATGAAAAATTCGTTAAATCAGAAGATTA
ATTACCGCACGGGAACAGTG

Downstream 100 bases:

>100_bases
GCAAGGCCCTGGCAGTAAACGCGACGGTATCGGGCCGTCAGCGATTTTTTGATTTTCTCTATAAGTGGGGCATGTTGCTG
ACCGTGGTGCTGCTGGTGGC

Product: putative ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYQGEVTINDQPVTIRSPRDAKQL
GIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSH
HCRFLILDEPTAPLDQHESERLFSVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKML
GHELSDIFPPPRPPHGEEVLLQVDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPW
RPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLS
GGNQQKVAIGKWLRGDANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI
PGAEAREETLLYYSTGGAAA

Sequences:

>Translated_500_residues
MSANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYQGEVTINDQPVTIRSPRDAKQL
GIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSH
HCRFLILDEPTAPLDQHESERLFSVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKML
GHELSDIFPPPRPPHGEEVLLQVDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPW
RPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLS
GGNQQKVAIGKWLRGDANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI
PGAEAREETLLYYSTGGAAA
>Mature_499_residues
SANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYQGEVTINDQPVTIRSPRDAKQLG
IHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHH
CRFLILDEPTAPLDQHESERLFSVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKMLG
HELSDIFPPPRPPHGEEVLLQVDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPWR
PRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLSG
GNQQKVAIGKWLRGDANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEIP
GAEAREETLLYYSTGGAAA

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: COG1129

COG function: function code G; ABC-type sugar transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=229, Percent_Identity=25.3275109170306, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI47078218, Length=203, Percent_Identity=26.6009852216749, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI45446740, Length=203, Percent_Identity=26.6009852216749, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI156105685, Length=261, Percent_Identity=24.904214559387, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1788472, Length=474, Percent_Identity=36.0759493670886, Blast_Score=314, Evalue=7e-87,
Organism=Escherichia coli, GI1790190, Length=493, Percent_Identity=35.6997971602434, Blast_Score=308, Evalue=7e-85,
Organism=Escherichia coli, GI1790525, Length=489, Percent_Identity=35.5828220858896, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1789991, Length=497, Percent_Identity=34.4064386317907, Blast_Score=299, Evalue=3e-82,
Organism=Escherichia coli, GI1788210, Length=496, Percent_Identity=33.8709677419355, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1787792, Length=474, Percent_Identity=37.3417721518987, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1788897, Length=473, Percent_Identity=35.7293868921776, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI48995001, Length=481, Percent_Identity=33.2640332640333, Blast_Score=274, Evalue=8e-75,
Organism=Escherichia coli, GI1788506, Length=534, Percent_Identity=25.8426966292135, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI48994943, Length=523, Percent_Identity=24.6653919694073, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1786345, Length=252, Percent_Identity=28.968253968254, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI87081709, Length=225, Percent_Identity=28.4444444444444, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=26.1061946902655, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI145693107, Length=558, Percent_Identity=24.1935483870968, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787712, Length=222, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790739, Length=231, Percent_Identity=27.7056277056277, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787029, Length=225, Percent_Identity=25.7777777777778, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=25.7777777777778, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790544, Length=245, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787370, Length=222, Percent_Identity=26.1261261261261, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1786975, Length=480, Percent_Identity=23.5416666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788225, Length=253, Percent_Identity=26.8774703557312, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=31.4553990610329, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787547, Length=244, Percent_Identity=28.2786885245902, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787548, Length=239, Percent_Identity=25.5230125523013, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082268, Length=206, Percent_Identity=29.6116504854369, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=26.3374485596708, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081782, Length=224, Percent_Identity=24.1071428571429, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788761, Length=222, Percent_Identity=27.4774774774775, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081834, Length=211, Percent_Identity=28.9099526066351, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=26.7489711934156, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786398, Length=249, Percent_Identity=24.8995983935743, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=232, Percent_Identity=26.2931034482759, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786703, Length=212, Percent_Identity=30.6603773584906, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=23.9837398373984, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786654, Length=236, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=222, Percent_Identity=23.8738738738739, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789962, Length=216, Percent_Identity=25.462962962963, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790467, Length=222, Percent_Identity=25.6756756756757, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788540, Length=237, Percent_Identity=28.6919831223629, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787089, Length=227, Percent_Identity=24.2290748898678, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787143, Length=232, Percent_Identity=26.2931034482759, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787164, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=24.8945147679325, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787758, Length=214, Percent_Identity=28.0373831775701, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789672, Length=225, Percent_Identity=21.7777777777778, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786803, Length=244, Percent_Identity=21.7213114754098, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=25.3456221198157, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=25.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787113, Length=212, Percent_Identity=30.188679245283, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788165, Length=217, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=27.9279279279279, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=29.646017699115, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71988343, Length=220, Percent_Identity=25, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666092, Length=206, Percent_Identity=23.3009708737864, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 54682; Mature: 54550

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYQG
CCCCCEEEEEEEEEEHHHHHHCCEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCEEE
EVTINDQPVTIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRV
EEEECCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHH
RQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHH
RLFSVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKML
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHH
GHELSDIFPPPRPPHGEEVLLQVDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCK
CCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHH
ALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSAD
HHHCCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCHHHHHCCCEEECCCEEEEEEECC
NSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLSGGNQQKVAIGKWLRGDANVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEHHEECCCCCEE
IFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI
EEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHEEECCEEEEEC
PGAEAREETLLYYSTGGAAA
CCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
SANRLEMHNISLAFSGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYQG
CCCCEEEEEEEEEEHHHHHHCCEEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCEEE
EVTINDQPVTIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRV
EEEECCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHH
RQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHH
RLFSVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKML
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHH
GHELSDIFPPPRPPHGEEVLLQVDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCK
CCHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCEEEEEECCCCCHHHHHH
ALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSAD
HHHCCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCHHHHHCCCEEECCCEEEEEEECC
NSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQTLRRLSGGNQQKVAIGKWLRGDANVL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEHHEECCCCCEE
IFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEI
EEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHEEECCEEEEEC
PGAEAREETLLYYSTGGAAA
CCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]