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The map label for this gene is ybdB [H]

Identifier: 152969186

GI number: 152969186

Start: 696895

End: 697308

Strand: Direct

Name: ybdB [H]

Synonym: KPN_00615

Alternate gene names: 152969186

Gene position: 696895-697308 (Clockwise)

Preceding gene: 152969185

Following gene: 152969187

Centisome position: 13.11

GC content: 66.43

Gene sequence:

>414_bases
ATGGCCTGGAAGCGAGAGCTCACGCTGGCGGCGCTGAACGCCAGCAGCGAAAACACCATGGTGGCGCATCTTGGCATCAT
CTACACCCGACTGGAAGCGGGGCTGCTGGAGGCGGAGATGCCGGTGGATGCGCGCACCCATCAGCCGTTTGGTCTGCTGC
ACGGCGGCGCCTCCGCGGCGCTGGCGGAGACGCTGGGCTCGATGGCCGGTTGGCTGATGACCGAAGAAGGGCAGTGCGTG
GTGGGCACCGAGCTTAACGCTACCCACCATCGTCCGGTCTCCAGCGGGAAAGTGCGCGGCGAATGCCGACCGCTGCATCT
TGGCCGCCAGAGCCAGAGCTGGGAGATAGTGGTGTATGACGAGAAGGGGCGGCGCTGCTGCACCTGTCGTCTGGGCACCG
CGGTGCTGGGCTAA

Upstream 100 bases:

>100_bases
GGAGATCGCCAATACCATTCTGTTCCTCGCCTCTTCTCACGCCAGCCATATTACGCTGCAGGATATTGTGGTCGATGGCG
GCTCGACGCTGGGGGCGTAA

Downstream 100 bases:

>100_bases
GAAGCCGCTATTTCCCCGGCTTGCGCTACGCTTATCCGGGCTACGTATAGTAGCCCGGATAAGGCGCAGCGCGCCGCCAT
CCGGGAATTTCCCTGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAWKRELTLAALNASSENTMVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGWLMTEEGQCV
VGTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYDEKGRRCCTCRLGTAVLG

Sequences:

>Translated_137_residues
MAWKRELTLAALNASSENTMVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGWLMTEEGQCV
VGTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYDEKGRRCCTCRLGTAVLG
>Mature_136_residues
AWKRELTLAALNASSENTMVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGWLMTEEGQCVV
GTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYDEKGRRCCTCRLGTAVLG

Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1786813, Length=137, Percent_Identity=83.9416058394161, Blast_Score=243, Evalue=2e-66,
Organism=Escherichia coli, GI1787976, Length=136, Percent_Identity=58.0882352941177, Blast_Score=163, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14799; Mature: 14668

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWKRELTLAALNASSENTMVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAA
CCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCCHHH
LAETLGSMAGWLMTEEGQCVVGTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYD
HHHHHHHHHCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEC
EKGRRCCTCRLGTAVLG
CCCCEEEEEECCCEECC
>Mature Secondary Structure 
AWKRELTLAALNASSENTMVAHLGIIYTRLEAGLLEAEMPVDARTHQPFGLLHGGASAA
CCCCCEEEEEECCCCCCEEEEHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCCHHH
LAETLGSMAGWLMTEEGQCVVGTELNATHHRPVSSGKVRGECRPLHLGRQSQSWEIVVYD
HHHHHHHHHCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEC
EKGRRCCTCRLGTAVLG
CCCCEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]