| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is cstA [H]
Identifier: 152969187
GI number: 152969187
Start: 698575
End: 700680
Strand: Direct
Name: cstA [H]
Synonym: KPN_00616
Alternate gene names: 152969187
Gene position: 698575-700680 (Clockwise)
Preceding gene: 152969186
Following gene: 152969188
Centisome position: 13.14
GC content: 60.87
Gene sequence:
>2106_bases ATGAATAATTCAGGGAAATACCTTATCTGGACACTGCTCTCCGTGATCGGAGCCTTTGCCCTCGGCTATATCGCCTTAAA CCGGGGTGAGCAGATAAATGCGCTGTGGATTGTCGTCGCGGCGGTCTGCGTTTATCTGATCGCATATCGTTTCTACGGTC TGTATATCGCCAAAACCGTTCTCGGCGTTGACCCGACGCGGATGACGCCGGCGGTACGACATAATGACGGCCTCGATTAT GTTCCGACCGACAAAAAAGTGCTGTTCGGTCACCATTTTGCCGCCATTGCCGGCGCGGGGCCGCTGGTGGGCCCGGTGCT TGCCGCGCAGATGGGCTACCTGCCGGGGATGATCTGGATCCTCGCCGGCGTGGTGCTGGCCGGCGCCGTACAGGACTTTA TGGTGCTGTTTGTTTCGACCCGTCGCGATGGCCGCTCGCTTGGCGAACTGGTTAAAGAGGAGATGGGGCCAACCGCTGGC GTCCTGGCGCTGGTGGCCTGCTTTATGATCATGGTCATCATCCTCGCGGTCCTGGCGATGATCGTGGTGAAAGCGTTGAC CCACAGTCCGTGGGGGACATACACCGTCGCCTTTACCATCCCGCTGGCGATCTTTATGGGTATCTATATTCGCTACCTGC GCCCGGGGCGCATCGGCGAGGTGTCGGTGATCGGCCTGGTGATGCTGGTGTTCGCCATCATCTCCGGCGGTTGGGTGGCG GAAAGCCCGACCTGGGCGCCGTGGTTTGATTACACCGGCGTACAGCTGACCTGGATCCTGGTGGGCTACGGCTTTGTCGC CGCGGTACTGCCGGTCTGGCTGCTGCTGGCCCCGCGCGACTACCTCTCCACCTTCCTGAAAATTGGCACCATTGTTGGGC TGGCGATTGGCATTCTGATTATGCGCCCGACCCTGACCATGCCGGCGCTGACCAAGTTCGTCGACGGTACCGGCCCGGTG TGGAGCGGCAACCTGTTCCCCTTCCTGTTTATCACCATCGCCTGCGGCGCGGTCTCCGGCTTCCACGCGCTGATCTCCTC CGGCACCACGCCGAAAATGTTGGCCAACGAAGGCCAGGCCTGCTTTATCGGCTACGGTGGTATGTTGATGGAATCCTTCG TCGCCATTATGGCGCTGGTGGCGGCCTGTATTATCGACCCGGGCGTCTACTTCGCGATGAACAGCCCGATGGCGGTGCTG GCGCCGGCGGGAACCACCGATGTGGTCGCCTCGGCGGCGCAGGTGGTGAGCGGCTGGGGCTTTAGCATTACCCCGGATAC GCTGCATCAAATCGCCAGCGAGGTCGGCGAACAGTCGATTATCTCCCGCGCCGGCGGCGCGCCAACCCTGGCGGTGGGGA TGGCCTACATCCTGCACGGCTCGCTGGGCGGGCTGATGGATGTCTCGTTCTGGTACCACTTCGCCATTCTGTTTGAGGCG CTGTTTATCCTGACGGCGGTTGATGCCGGCACCCGTGCGGCGCGCTTTATGCTGCAGGATCTGCTGGGCGTGATTAGCCC GGGGCTGAAAAAAACCAGTTCGCTGCCGGCCAACCTGCTGGCGACCGCGCTGTGCGTCCTGGCGTGGGGCTACTTCCTGC ATCAGGGGGTAGTGGATCCGCTGGGCGGGATTAACACCCTGTGGCCGCTGTTCGGTATCGCCAACCAGATGCTGGCGGGG ATGGCGCTGATGCTCTGCGCGGTGGTCCTGTTCAAGATGAAACGCCAGCGCTACGCGTGGGTGGCGCTGCTGCCGACAAG CTGGCTGCTGATCTGTACCCTGACCGCCGGCTGGCAGAAGTCGTTCAGCCCGGACACCAAAGTGGGTTTCCTGGCCATCG CTAATAAATTCCAGGCGATGATCGACAGCGGCAACATTCCGCCGCAATATACCGAATCACAGCTGGCGCAGCTGGTGTTT AACAACCGTCTCGATGCCGGGCTGACCATCTTCTTTATGATTGTGGTGGTGGTGCTGGCGCTGTTCTCGATTAAAACCGC GCTGGCGGCGCTGAAAGAGGATAAACCGACGGCGAAAGAGACGCCGTATGAGCCTATGCCTGAAAACCTGGACGCGATTG ATACCCAGGCGAAAGGGGCGCATTAA
Upstream 100 bases:
>100_bases GGGTGTACGGCATCTGCGCTGTTTCGATGTTGTTAAATTCTGCGTTGTGATCTAGAAACAAAATGTAACATCCTGATTAC CCTACCGGTGGACCACAACA
Downstream 100 bases:
>100_bases CCGGTGTGCCGGGTGGCGGCTTCGCCTTACCCGGCCTACATTTCCGATCCTCCTTCTCCCTTTGGGAGAGGGAAACAAAA GAGAAATGACTTATGTTCGA
Product: carbon starvation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG VLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVL APAGTTDVVASAAQVVSGWGFSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMIVVVVLALFSIKTALAALKEDKPTAKETPYEPMPENLDAIDTQAKGAH
Sequences:
>Translated_701_residues MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG VLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVL APAGTTDVVASAAQVVSGWGFSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMIVVVVLALFSIKTALAALKEDKPTAKETPYEPMPENLDAIDTQAKGAH >Mature_701_residues MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDPTRMTPAVRHNDGLDY VPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG VLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFVDGTGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVL APAGTTDVVASAAQVVSGWGFSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAG MALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVF NNRLDAGLTIFFMIVVVVLALFSIKTALAALKEDKPTAKETPYEPMPENLDAIDTQAKGAH
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=701, Percent_Identity=94.0085592011412, Blast_Score=1344, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=701, Percent_Identity=62.0542082738944, Blast_Score=861, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 75135; Mature: 75135
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWI HCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAM HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MRPTLTMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA HCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE CFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWG EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCC FSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDP HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCC SFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMIVVVVLA CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LFSIKTALAALKEDKPTAKETPYEPMPENLDAIDTQAKGAH HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWI HCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAM HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVA HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC ESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MRPTLTMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA HCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCE CFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWG EEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHCCC FSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDP HHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCC SFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMIVVVVLA CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LFSIKTALAALKEDKPTAKETPYEPMPENLDAIDTQAKGAH HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]