Click here to switch to the map view.

The map label for this gene is 152969003

Identifier: 152969003

GI number: 152969003

Start: 473167

End: 474369

Strand: Direct

Name: 152969003

Synonym: KPN_00430

Alternate gene names: NA

Gene position: 473167-474369 (Clockwise)

Preceding gene: 152969002

Following gene: 152969004

Centisome position: 8.9

GC content: 55.28

Gene sequence:

>1203_bases
ATGAAAAGATTCACACCCGCATGGCTTGCGGTTTGTCTGGCATGCAGTTTCTCCACCTCTTCTCTGGCCGCGGACGCGCT
TGCAACCCGCGCGTTTCAGGGCATGCCGGCGGACTTTATCAAAGGCGCGGATATCTCCACGCTGCTGGACGCCGAAAAGC
ACGGGGCGACGTTCTACGATCAGAATAATCAGCGCAAGGATCCGATCGCTATTCTGAAAGAGAACGGCGTCAACTATGTC
CGCCTCCGTCTGTGGGTGGATCCGCAATCGGCGAGCGGCGAGGATTATGGCGGTGGGAACAATGATCTGGCCACCACCCT
GGCGCTGGCGAAACGGGCGAAAGCCCAGGGGATGAAGCTGTTGCTTGATTTTCACTACAGCGATTTCTGGACCGATCCCG
GCAAGCAGTTCAAGCCGAAAGCCTGGGAAAAGCTGGATTACCCGCAGCTGAAAACGGCGATTCATGACTATACCCGCGAT
ACCATCGCCCGCTTTAAGCAGGCGGGCGTGCTGCCGGATATGGTGCAGATCGGCAACGAAATCAACGGCGGCATCCTGTG
GCCGGAAGGGAAAAGCTGGGGGCAGGGCGGCGGAGAGTTCGACCGGCTGGCTGGCCTGCTGAACGCGGCTATCGCTGGCC
TGAAGGAGAACCTGCGCCAGGGCGAGCAGGTGAAAATCATGCTGCATCTGGCCGAAGGGACCAAGAACGATACCTTCCGC
TGGTGGTTTGATGAGATCGACAAGCGCCATGTACCGTATGACGTGATTGGTCTGTCGATGTACACCTACTGGAATGGCCC
GATCAGCGCCCTGAAGGCCAATATGGATGACATCAGCAAACGCTATAACAAAGACGTCATCGTCGTCGAGGCGGCCTATG
CCTATACCCTGGCCAACTGCGATAACGCGGAAAATAGTTTCCAGGCGAAAGAGGAAAAGGATGGGGGATATCCCGCCAGC
GTACAGGGGCAATATAACTATATTCACGATTTAATGCAGGCGGTGGTTGATGTGCCAGACCAGCGTGGTAAAGGTATTTT
CTATTGGGAGCCTACATGGATTGCCGTGCCGGGAAATACCTGGGCCACCCCGGCGGGGATGAAATATATCCACGACGAGT
GGAAAGAGGGTAATGCACGTGAAAATCAGGCGCTATTTGATTGCCAGGGAAAAGTATTGCCGTCGGTAAAAGTTTTTAAT
TAA

Upstream 100 bases:

>100_bases
GGGGCGGTGCTGATCGCCGTACCGGTGGCGATCCTCTACCTGGCGCTACAAAAATACTTCGTCTCCGGCCTGACCTCGGG
CAGTACTAAAGGATAAGCAC

Downstream 100 bases:

>100_bases
TTTTTTTGTCGTCTTTTTCAGGAAGTTTATTATGAATAAATTTGCACCTTTACATCCGAAGGTTAGTACGCTGCTGCATG
GCGCGGATTATAATCCGGAG

Product: putative galactosidase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN

Sequences:

>Translated_400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
>Mature_400_residues
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYDQNNQRKDPIAILKENGVNYV
RLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKLLLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRD
TIARFKQAGVLPDMVQIGNEINGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANCDNAENSFQAKEEKDGGYPAS
VQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNTWATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 44787; Mature: 44787

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYD
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEC
QNNQRKDPIAILKENGVNYVRLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRDTIARFKQAGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
INGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANC
EHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEEEHHEEEECCC
DNAENSFQAKEEKDGGYPASVQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNT
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
WATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECC
>Mature Secondary Structure
MKRFTPAWLAVCLACSFSTSSLAADALATRAFQGMPADFIKGADISTLLDAEKHGATFYD
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCEEEC
QNNQRKDPIAILKENGVNYVRLRLWVDPQSASGEDYGGGNNDLATTLALAKRAKAQGMKL
CCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
LLDFHYSDFWTDPGKQFKPKAWEKLDYPQLKTAIHDYTRDTIARFKQAGVLPDMVQIGNE
EEEECCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
INGGILWPEGKSWGQGGGEFDRLAGLLNAAIAGLKENLRQGEQVKIMLHLAEGTKNDTFR
CCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEE
WWFDEIDKRHVPYDVIGLSMYTYWNGPISALKANMDDISKRYNKDVIVVEAAYAYTLANC
EHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEEEHHEEEECCC
DNAENSFQAKEEKDGGYPASVQGQYNYIHDLMQAVVDVPDQRGKGIFYWEPTWIAVPGNT
CCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
WATPAGMKYIHDEWKEGNARENQALFDCQGKVLPSVKVFN
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA