| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is ganA [H]
Identifier: 152969004
GI number: 152969004
Start: 474401
End: 476458
Strand: Direct
Name: ganA [H]
Synonym: KPN_00431
Alternate gene names: 152969004
Gene position: 474401-476458 (Clockwise)
Preceding gene: 152969003
Following gene: 152969005
Centisome position: 8.93
GC content: 58.26
Gene sequence:
>2058_bases ATGAATAAATTTGCACCTTTACATCCGAAGGTTAGTACGCTGCTGCATGGCGCGGATTATAATCCGGAGCAATGGGAGAA TGACCCCGATATTATTGATAAAGACATTGCCATGATGCAGCAGGCAAAATGCAATGTGATGTCGGTGGGAATATTTAGCT GGGCGAAACTGGAGCCACGCGAAGGGGTATTTAATTTCGCCTGGCTGGATATTATCCTCGATAAACTGTATGCCGCCGGC ATTCATGTCTTTCTGGCCACGCCGAGCGGCGCGCGTCCGGCGTGGATGTCGCAGCGCTATCCGCAGGTTCTGCGGGTGGG GCGCGATCGGGTGCCGGCCCTGCACGGCGGCCGTCACAACCACTGTATGTCGTCACCGGTCTATCGCGAGAAAACCCTGC AAATCAATACCCTGCTGGCAGAACGTTATTCCTCACACCCGGCGGTGCTGGGCTGGCATATTTCCAACGAATATGGCGGT GAATGCCATTGCGATCTCTGCCAGAACCGTTTTCGCGACTGGCTGAAGGCGCGTTACCAGACCCTGGAGAACCTCAACCA GGCCTGGTGGAGCACCTTCTGGAGTCATACCTATACCGACTGGTCGCAGATTGAATCGCCTGCGCCGCAGGGCGAGATGT CGATCCACGGTCTTAATCTTGACTGGCATCGCTTTAACACCGCTCAGGTGACTGATTTCTGCCGCCATGAAATTGCTCCG CTGAAGGCGGCGAATGCCTCCCTGCCGGTGACTACCAACTTTATGGAGTATTTCTACGATTACGACTACTGGCGGCTGGC GGAGGCGCTGGATTTCATCTCCTGGGACAGCTATCCGATGTGGCACCGCGATAAAGACGAAACCGCGCTGGCCTGTTACA CCGCGATGTATCACGACATGATGCGCAGCCTGAAGGGCGGCAAACCGTTTGTGCTGATGGAGTCCACCCCGGGCGCCACC AACTGGCAGCCGACCAGCAAACTGAAGAAGCCGGGAATGCATATTCTTTCCTCGCTGCAGGCGGTGGCGCATGGCGCCGA CTCGGTGCAGTATTTCCAGTGGCGGAAAAGCCGCGGTTCGGTTGAGAAATTTCACGGCGCAGTGGTCGACCACGTCGGAC ATATTGATACCCGCATTGGCCGCGAAGTCTGCCAGCTCGGCGTGATCCTCAGCAAGCTGCCGGAAGTGAGAGGCTGTCGC ACCGAGGCGAAAGTAGCGATTATCTTCGACCAGCAGAACCGCTGGGCGCTGGATGACGCCCAGGGGCCGCGTAATCTTGG GATGGAATATGAGAAGACGGTCAACGAGCACTACCGCCCGTTCTGGGAGCAGGGCATCGCCGTCGATGTGATTGACGCCG ATGTCGATTTAACGCCGTATCAGTTAGTGATTGCCCCGATGTTATATATGGTGCGCGACGGCTTTGCCGGTCGGGCGGAG GCGTTTGTCGCCAACGGCGGCCACCTGGTGACCACCTACTGGACCGGTATCGTCAATGAGTCCGATCTCTGCTATCTCGG CGGCTTCCCGGGCCCGCTGCGCAATCTGCTGGGGATCTGGGCGGAAGAGATCGACTGCCTGAATGACGGCGAGTTTAATC TGGTGCAGGGGCTTGCCGGGAATCAGTGCGGTCTGCAGGGCCCTTATCAGGTGCGCCATCTCTGCGAACTGATCCATATC GAGAGCGCCCAGGCGCTGGCCACCTACCGGGATGATTTTTATGCCGGACGGCCGGCTGTGACGGTGAACGCGTTCGGGAA AGGCAAAGCCTGGCATGTGGCCTCCCGCAACGATTTAGCCTTCCAGCGCGATTTCTTTACCGCCCTGAGCAAGGAGCTGG CCCTGCCGCGGGCGATAGCGACGGAGTTACCACCCGGCGTGGTGGCGACTGCGCGCACCGACGGTGACAACGCATTTATC TTCCTGCAGAACTACAGCGCGCAAAACCATACCCTGACCCTGCCGCAAGGGTATTGGGATTGCCTGACCGACGCGGCGGT ATCGGCTCCACTGACCCTGTCGGCATGGGATTGCCGTATTCTCCGTCGTCACGCGTAA
Upstream 100 bases:
>100_bases GCACGTGAAAATCAGGCGCTATTTGATTGCCAGGGAAAAGTATTGCCGTCGGTAAAAGTTTTTAATTAATTTTTTTGTCG TCTTTTTCAGGAAGTTTATT
Downstream 100 bases:
>100_bases TTTCTTCTTCTCCACGCCTGCTCTGACGAGCAGGCTTTTTTTTATCTTAAACCTGGAGTTTATTATGGTGAGTTTAAAAT CCTTCCTGCACTATTTCTCC
Product: putative glycoside hydrolase
Products: NA
Alternate protein names: Beta-gal; Beta-1,4-galactooligomerase; Galactooligomerase [H]
Number of amino acids: Translated: 685; Mature: 685
Protein sequence:
>685_residues MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPREGVFNFAWLDIILDKLYAAG IHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHNHCMSSPVYREKTLQINTLLAERYSSHPAVLGWHISNEYGG ECHCDLCQNRFRDWLKARYQTLENLNQAWWSTFWSHTYTDWSQIESPAPQGEMSIHGLNLDWHRFNTAQVTDFCRHEIAP LKAANASLPVTTNFMEYFYDYDYWRLAEALDFISWDSYPMWHRDKDETALACYTAMYHDMMRSLKGGKPFVLMESTPGAT NWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRIGREVCQLGVILSKLPEVRGCR TEAKVAIIFDQQNRWALDDAQGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYQLVIAPMLYMVRDGFAGRAE AFVANGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAGNQCGLQGPYQVRHLCELIHI ESAQALATYRDDFYAGRPAVTVNAFGKGKAWHVASRNDLAFQRDFFTALSKELALPRAIATELPPGVVATARTDGDNAFI FLQNYSAQNHTLTLPQGYWDCLTDAAVSAPLTLSAWDCRILRRHA
Sequences:
>Translated_685_residues MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPREGVFNFAWLDIILDKLYAAG IHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHNHCMSSPVYREKTLQINTLLAERYSSHPAVLGWHISNEYGG ECHCDLCQNRFRDWLKARYQTLENLNQAWWSTFWSHTYTDWSQIESPAPQGEMSIHGLNLDWHRFNTAQVTDFCRHEIAP LKAANASLPVTTNFMEYFYDYDYWRLAEALDFISWDSYPMWHRDKDETALACYTAMYHDMMRSLKGGKPFVLMESTPGAT NWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRIGREVCQLGVILSKLPEVRGCR TEAKVAIIFDQQNRWALDDAQGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYQLVIAPMLYMVRDGFAGRAE AFVANGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAGNQCGLQGPYQVRHLCELIHI ESAQALATYRDDFYAGRPAVTVNAFGKGKAWHVASRNDLAFQRDFFTALSKELALPRAIATELPPGVVATARTDGDNAFI FLQNYSAQNHTLTLPQGYWDCLTDAAVSAPLTLSAWDCRILRRHA >Mature_685_residues MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPREGVFNFAWLDIILDKLYAAG IHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHNHCMSSPVYREKTLQINTLLAERYSSHPAVLGWHISNEYGG ECHCDLCQNRFRDWLKARYQTLENLNQAWWSTFWSHTYTDWSQIESPAPQGEMSIHGLNLDWHRFNTAQVTDFCRHEIAP LKAANASLPVTTNFMEYFYDYDYWRLAEALDFISWDSYPMWHRDKDETALACYTAMYHDMMRSLKGGKPFVLMESTPGAT NWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGSVEKFHGAVVDHVGHIDTRIGREVCQLGVILSKLPEVRGCR TEAKVAIIFDQQNRWALDDAQGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYQLVIAPMLYMVRDGFAGRAE AFVANGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAGNQCGLQGPYQVRHLCELIHI ESAQALATYRDDFYAGRPAVTVNAFGKGKAWHVASRNDLAFQRDFFTALSKELALPRAIATELPPGVVATARTDGDNAFI FLQNYSAQNHTLTLPQGYWDCLTDAAVSAPLTLSAWDCRILRRHA
Specific function: Hydrolyzes oligosaccharides released by the endo-1,4- beta-galactosidase galA from arabinogalactan type I, a pectic plant polysaccharide. It is unable to use lactose as a sole carbon source [H]
COG id: COG1874
COG function: function code G; Beta-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 42 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013739 - InterPro: IPR013738 - InterPro: IPR013780 - InterPro: IPR003476 - InterPro: IPR013529 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]
EC number: =3.2.1.23 [H]
Molecular weight: Translated: 77586; Mature: 77586
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPR CCCCCCCCCCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCC EGVFNFAWLDIILDKLYAAGIHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHN CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCC HCMSSPVYREKTLQINTLLAERYSSHPAVLGWHISNEYGGECHCDLCQNRFRDWLKARYQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH TLENLNQAWWSTFWSHTYTDWSQIESPAPQGEMSIHGLNLDWHRFNTAQVTDFCRHEIAP HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCEECCCHHHHHHHHHHCCC LKAANASLPVTTNFMEYFYDYDYWRLAEALDFISWDSYPMWHRDKDETALACYTAMYHDM CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH MRSLKGGKPFVLMESTPGATNWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGS HHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC VEKFHGAVVDHVGHIDTRIGREVCQLGVILSKLPEVRGCRTEAKVAIIFDQQNRWALDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCEECCCC QGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYQLVIAPMLYMVRDGFAGRAE CCCHHCCCHHHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCE AFVANGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAG EEEECCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCC NQCGLQGPYQVRHLCELIHIESAQALATYRDDFYAGRPAVTVNAFGKGKAWHVASRNDLA CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCH FQRDFFTALSKELALPRAIATELPPGVVATARTDGDNAFIFLQNYSAQNHTLTLPQGYWD HHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEECCCHHHH CLTDAAVSAPLTLSAWDCRILRRHA HHHHHHHCCCEEEEHHHHHHHHHCC >Mature Secondary Structure MNKFAPLHPKVSTLLHGADYNPEQWENDPDIIDKDIAMMQQAKCNVMSVGIFSWAKLEPR CCCCCCCCCCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCC EGVFNFAWLDIILDKLYAAGIHVFLATPSGARPAWMSQRYPQVLRVGRDRVPALHGGRHN CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCC HCMSSPVYREKTLQINTLLAERYSSHPAVLGWHISNEYGGECHCDLCQNRFRDWLKARYQ CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH TLENLNQAWWSTFWSHTYTDWSQIESPAPQGEMSIHGLNLDWHRFNTAQVTDFCRHEIAP HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCEECCCHHHHHHHHHHCCC LKAANASLPVTTNFMEYFYDYDYWRLAEALDFISWDSYPMWHRDKDETALACYTAMYHDM CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH MRSLKGGKPFVLMESTPGATNWQPTSKLKKPGMHILSSLQAVAHGADSVQYFQWRKSRGS HHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC VEKFHGAVVDHVGHIDTRIGREVCQLGVILSKLPEVRGCRTEAKVAIIFDQQNRWALDDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCEECCCC QGPRNLGMEYEKTVNEHYRPFWEQGIAVDVIDADVDLTPYQLVIAPMLYMVRDGFAGRAE CCCHHCCCHHHHHHHHHCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCE AFVANGGHLVTTYWTGIVNESDLCYLGGFPGPLRNLLGIWAEEIDCLNDGEFNLVQGLAG EEEECCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCC NQCGLQGPYQVRHLCELIHIESAQALATYRDDFYAGRPAVTVNAFGKGKAWHVASRNDLA CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCH FQRDFFTALSKELALPRAIATELPPGVVATARTDGDNAFIFLQNYSAQNHTLTLPQGYWD HHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCEEECCCHHHH CLTDAAVSAPLTLSAWDCRILRRHA HHHHHHHCCCEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA