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The map label for this gene is rcnR [H]

Identifier: 152968997

GI number: 152968997

Start: 466060

End: 466404

Strand: Direct

Name: rcnR [H]

Synonym: KPN_00424

Alternate gene names: 152968997

Gene position: 466060-466404 (Clockwise)

Preceding gene: 152968995

Following gene: 152969000

Centisome position: 8.77

GC content: 52.75

Gene sequence:

>345_bases
ATGGTATGCTGGCAGGCGTTGCTGACCACGCAGGTCGGTAATCCCGGACAGAATGAAACGGTGGATCGTGCAATGTCACA
TACAGTTCGACACAAAAAGATGTTACTGACCCGGCTGAAGAAAATTCAGGGGCAGAGTACCGCGTTAGAGAAAATGCTTA
ATCGCGAGCATGAGTGCGCTGAAATATTACAGCAGCTGGCGGCGATCCGCGGCGCGGTCAACGGCATGATGCTGCAGGTT
ATTCAGGGGCATCTTACCGACCATGTGGTGAAAGAGCCTGACGAGACGCAGCGCGAAGCGGATCTGGAGACGGTGATGCA
GGTGATTAAATCCTATCTGAAGTAG

Upstream 100 bases:

>100_bases
TCGTTCATATCGGGATCCTTGCCAAAAGTGCGATTATCCTACTCCCCCCCAGTAGTAAAATACTACCCCCCAGTAGATAA
AGCGGCTAATAAAAAGGATC

Downstream 100 bases:

>100_bases
CGCCCCCTGACGTTCCGCTCAAGCCACCCGCCGCTTAATGCGCATGGAGGTTATGCTCTGCCCACAGAATGAACTGCTCT
TTTGGCAGCGCTTTGCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MVCWQALLTTQVGNPGQNETVDRAMSHTVRHKKMLLTRLKKIQGQSTALEKMLNREHECAEILQQLAAIRGAVNGMMLQV
IQGHLTDHVVKEPDETQREADLETVMQVIKSYLK

Sequences:

>Translated_114_residues
MVCWQALLTTQVGNPGQNETVDRAMSHTVRHKKMLLTRLKKIQGQSTALEKMLNREHECAEILQQLAAIRGAVNGMMLQV
IQGHLTDHVVKEPDETQREADLETVMQVIKSYLK
>Mature_114_residues
MVCWQALLTTQVGNPGQNETVDRAMSHTVRHKKMLLTRLKKIQGQSTALEKMLNREHECAEILQQLAAIRGAVNGMMLQV
IQGHLTDHVVKEPDETQREADLETVMQVIKSYLK

Specific function: Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter [H]

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=60, Blast_Score=116, Evalue=4e-28,
Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=39.1304347826087, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12933; Mature: 12933

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCWQALLTTQVGNPGQNETVDRAMSHTVRHKKMLLTRLKKIQGQSTALEKMLNREHECA
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH
EILQQLAAIRGAVNGMMLQVIQGHLTDHVVKEPDETQREADLETVMQVIKSYLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVCWQALLTTQVGNPGQNETVDRAMSHTVRHKKMLLTRLKKIQGQSTALEKMLNREHECA
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHH
EILQQLAAIRGAVNGMMLQVIQGHLTDHVVKEPDETQREADLETVMQVIKSYLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA