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The map label for this gene is ybaV [H]

Identifier: 152968977

GI number: 152968977

Start: 447686

End: 448030

Strand: Direct

Name: ybaV [H]

Synonym: KPN_00404

Alternate gene names: 152968977

Gene position: 447686-448030 (Clockwise)

Preceding gene: 152968976

Following gene: 152968978

Centisome position: 8.42

GC content: 60.87

Gene sequence:

>345_bases
ATGGCCGCGGGCGTTCTGGTTTTTGCGGTAGGGGTACAGGGGGCGCTGGCGGCACCCGCCAGCGGCAAAGCGGCGGTGAA
TAAAGAAAATGTGCAGGCGTCCTCTTCGGCGAAGGCGGAAGCGGTGCCCGGCGAGTCTGACAACGGGGCGACAAAGGTCA
GCATTAACCGCGCCAGCGCCGAACAGCTGGCGCAGGCGTTGAATGGCGTAGGATTGAAAAAAGCCCAGGCTATTGTCAGC
TACCGCGAAGAGTACGGGCCGTTCAAAACCCTCGATGATCTGAAGCAGGTCCCGGGAATGGGGAGCGCGTTGGTGGAGCG
CAATTTAGCCCATCTGACGCTGTAA

Upstream 100 bases:

>100_bases
CTGTGATTTGCCTTTTGTCGACTATCCGCACTGACGCTATCGTGACCTTGCTGTCTACACACAAGGAGATATCAGCATGA
AATATGGAATAAAAGCACTG

Downstream 100 bases:

>100_bases
ATTTTATGCCAGACCTTGCACAGCGGTGATTTTTTGCCAGGATAAAGAGGTTGCATCAAGTGGTGTGACCTCTTACCTCA
TAAACAACAATAACAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAAGVLVFAVGVQGALAAPASGKAAVNKENVQASSSAKAEAVPGESDNGATKVSINRASAEQLAQALNGVGLKKAQAIVS
YREEYGPFKTLDDLKQVPGMGSALVERNLAHLTL

Sequences:

>Translated_114_residues
MAAGVLVFAVGVQGALAAPASGKAAVNKENVQASSSAKAEAVPGESDNGATKVSINRASAEQLAQALNGVGLKKAQAIVS
YREEYGPFKTLDDLKQVPGMGSALVERNLAHLTL
>Mature_113_residues
AAGVLVFAVGVQGALAAPASGKAAVNKENVQASSSAKAEAVPGESDNGATKVSINRASAEQLAQALNGVGLKKAQAIVSY
REEYGPFKTLDDLKQVPGMGSALVERNLAHLTL

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

Organism=Escherichia coli, GI1786646, Length=103, Percent_Identity=63.1067961165049, Blast_Score=123, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004509
- InterPro:   IPR003583 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11562; Mature: 11431

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGVLVFAVGVQGALAAPASGKAAVNKENVQASSSAKAEAVPGESDNGATKVSINRASA
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
EQLAQALNGVGLKKAQAIVSYREEYGPFKTLDDLKQVPGMGSALVERNLAHLTL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHCCHHHCCC
>Mature Secondary Structure 
AAGVLVFAVGVQGALAAPASGKAAVNKENVQASSSAKAEAVPGESDNGATKVSINRASA
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
EQLAQALNGVGLKKAQAIVSYREEYGPFKTLDDLKQVPGMGSALVERNLAHLTL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]