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The map label for this gene is ybaW [H]

Identifier: 152968978

GI number: 152968978

Start: 448142

End: 448543

Strand: Direct

Name: ybaW [H]

Synonym: KPN_00405

Alternate gene names: 152968978

Gene position: 448142-448543 (Clockwise)

Preceding gene: 152968977

Following gene: 152968981

Centisome position: 8.43

GC content: 53.73

Gene sequence:

>402_bases
ATGCAGACACAAATTAAAGTTCGCGGCTATCATCTGGACGTCTACCAGCATGTGAACAACGCTCGCTACCTGGAGTTCCT
TGAGGAAGCCCGCTGGGACGGCCTGGAAAACAGCCCCGCGTTTCAGTGGATGATGGAGAAAAACATCGCCTTCGTGGTGG
TGAATATCAATATTAACTATCGTCGTCCGGCGGTACTGGGCGATGTGCTGACGGTGAGCAGCAAACTGGAGCAACTCAAC
GGCAAAAGCGGCACCCTAAGCCAGGTGGTCACCCTCAACCCCAATGGCGAAGTAGTGGCCGATGCGCTGATTACCTTCGT
TTGTATCGATTTGAAAACCCAGAAGGCGCTGCCGCTGGAAGGGGAATTGCGTGCGAAACTTGACCAGATGAACCTGCGCT
GA

Upstream 100 bases:

>100_bases
GACCTTGCACAGCGGTGATTTTTTGCCAGGATAAAGAGGTTGCATCAAGTGGTGTGACCTCTTACCTCATAAACAACAAT
AACAGAAAGGCATTAGTGCT

Downstream 100 bases:

>100_bases
CAACCGTCGTGCGAGTGGCGGGCCCACGGCAGGTGATGAACCCGTAGCCCCGGTAAGCATCGCGCCACCGGGGAATTTGA
GTCAAAGCTCCGGTAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Acyl-CoA thioester hydrolase ybaW; Thioesterase 3 [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININYRRPAVLGDVLTVSSKLEQLN
GKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLEGELRAKLDQMNLR

Sequences:

>Translated_133_residues
MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININYRRPAVLGDVLTVSSKLEQLN
GKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLEGELRAKLDQMNLR
>Mature_133_residues
MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININYRRPAVLGDVLTVSSKLEQLN
GKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLEGELRAKLDQMNLR

Specific function: Long-chain acyl-CoA thioesterase with a preference for 3,5-tetradecadienoyl-CoA [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786647, Length=130, Percent_Identity=85.3846153846154, Blast_Score=236, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15118; Mature: 15118

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININY
CCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCEEEEEEEEEECC
RRPAVLGDVLTVSSKLEQLNGKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLE
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
GELRAKLDQMNLR
CHHHHHHHHCCCC
>Mature Secondary Structure
MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSPAFQWMMEKNIAFVVVNININY
CCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCHHEEEEECCEEEEEEEEEECC
RRPAVLGDVLTVSSKLEQLNGKSGTLSQVVTLNPNGEVVADALITFVCIDLKTQKALPLE
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
GELRAKLDQMNLR
CHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]