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The map label for this gene is fimF [H]

Identifier: 152968849

GI number: 152968849

Start: 311624

End: 312142

Strand: Direct

Name: fimF [H]

Synonym: KPN_00275

Alternate gene names: 152968849

Gene position: 311624-312142 (Clockwise)

Preceding gene: 152968848

Following gene: 152968850

Centisome position: 5.86

GC content: 52.41

Gene sequence:

>519_bases
ATGAAAAAATTATCAGCAGCTGCGTTTGCATTTGGTCTGTTATCTGTGTCTGTATCTCAGGCATTGGCGGCGGATGCCAC
CGTTAACTTCAGCGGAACCATTCTTCAGGAAGCCTGCAGTGTAGATACTTCAGACAATACTGTTAACGTTCAGCTAGGCA
CCTACGGTGCTGCTCAATTCCCGACGGTAGGGACAACGACCCTTCCTGTTCCTTTCGCCATCAACTTAACGGGTTGTCCG
GCTTCAGGTGGCCCGACGGCTGCACTGGTGACCTTTTCAGGGGCCGCGGATGCGGCCGGTGACCTGGCGTTGACCGCAGG
CGGCGCATCGGGCGTTTCCATTAATATCAAAAAAGCAGATGGTACCAACATTGATATTAACTCTACCGATTCCGGTATTG
CACTGACTAGCGCTACGACCCAACAGCTCCGCTTTACCGCTAATTACATCAGTACTGCGGCTTCTGTCACCGCAGGCGCG
GCTAACGCCGTCGCCCAGGTAAACATCTCTTATATGTAA

Upstream 100 bases:

>100_bases
TATGTTGCTGCTCAAGGCCATTCATATGATATGGCTCTGCAACACTTTATAGCAATATGCCCCGAAGCACCTCGGTGGCT
TATATTAAGGATAATGATGT

Downstream 100 bases:

>100_bases
TTTTTGACATGCAGCGGAGGTGGTAACACCTCCGCTACCGGAGTATTAATGAAAGCGTTACTTGTTTTATCTTTAATGAC
GTCATGTTTGATTTTTTCAA

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKLSAAAFAFGLLSVSVSQALAADATVNFSGTILQEACSVDTSDNTVNVQLGTYGAAQFPTVGTTTLPVPFAINLTGCP
ASGGPTAALVTFSGAADAAGDLALTAGGASGVSINIKKADGTNIDINSTDSGIALTSATTQQLRFTANYISTAASVTAGA
ANAVAQVNISYM

Sequences:

>Translated_172_residues
MKKLSAAAFAFGLLSVSVSQALAADATVNFSGTILQEACSVDTSDNTVNVQLGTYGAAQFPTVGTTTLPVPFAINLTGCP
ASGGPTAALVTFSGAADAAGDLALTAGGASGVSINIKKADGTNIDINSTDSGIALTSATTQQLRFTANYISTAASVTAGA
ANAVAQVNISYM
>Mature_172_residues
MKKLSAAAFAFGLLSVSVSQALAADATVNFSGTILQEACSVDTSDNTVNVQLGTYGAAQFPTVGTTTLPVPFAINLTGCP
ASGGPTAALVTFSGAADAAGDLALTAGGASGVSINIKKADGTNIDINSTDSGIALTSATTQQLRFTANYISTAASVTAGA
ANAVAQVNISYM

Specific function: Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Involved in the integration of fimH in the fimbriae [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=166, Percent_Identity=35.5421686746988, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787781, Length=165, Percent_Identity=32.7272727272727, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI87082421, Length=148, Percent_Identity=30.4054054054054, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789531, Length=199, Percent_Identity=30.1507537688442, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786746, Length=177, Percent_Identity=30.5084745762712, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 16889; Mature: 16889

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSAAAFAFGLLSVSVSQALAADATVNFSGTILQEACSVDTSDNTVNVQLGTYGAAQF
CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCCC
PTVGTTTLPVPFAINLTGCPASGGPTAALVTFSGAADAAGDLALTAGGASGVSINIKKAD
CCCCCEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECC
GTNIDINSTDSGIALTSATTQQLRFTANYISTAASVTAGAANAVAQVNISYM
CCEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKKLSAAAFAFGLLSVSVSQALAADATVNFSGTILQEACSVDTSDNTVNVQLGTYGAAQF
CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCCEEEEEEECCCCCCC
PTVGTTTLPVPFAINLTGCPASGGPTAALVTFSGAADAAGDLALTAGGASGVSINIKKAD
CCCCCEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECC
GTNIDINSTDSGIALTSATTQQLRFTANYISTAASVTAGAANAVAQVNISYM
CCEEEECCCCCCEEEEECCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890081; 7610040; 9278503; 1970114 [H]