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The map label for this gene is citD2 [H]

Identifier: 152968616

GI number: 152968616

Start: 37222

End: 37515

Strand: Direct

Name: citD2 [H]

Synonym: KPN_00035

Alternate gene names: 152968616

Gene position: 37222-37515 (Clockwise)

Preceding gene: 152968615

Following gene: 152968617

Centisome position: 0.7

GC content: 58.16

Gene sequence:

>294_bases
ATGGAAATGAAGATTGACGCCCTGGCCGGCACGCTGGAGTCCAGCGATGTGATGGTCAGGATTGGACCCGCGGCGCAGCC
GGGCATTCAGCTGGAAATCGACAGCATTGTGAAACAACAGTTTGGCGCTGCGATTGAGCAGGTAGTGAGAGAAACGCTGG
CTCAGCTTGGCGTGAAACAGGCCAACGTGGTGGTCGATGATAAAGGCGCGCTGGAATGTGTTTTGCGAGCTCGCGTACAG
GCCGCGGCGCTGCGCGCGGCGCAACAGACCCAATTACAATGGAGCCAGCTATGA

Upstream 100 bases:

>100_bases
GGCGCTGGTACCGCCGGGAACCCTCTCTTTTCTGATGCAACTGGCGGAAAGCGAACATCAAACCGCCTGATTTATACGCC
CTAACTAAGGATTTTCCCCT

Downstream 100 bases:

>100_bases
AACCACGTCGCAGTATGTTGTTCATCCCTGGCGCCAATGCCGCCATGTTAAGCACGTCATTCGTCTACGGCGCCGATGCG
GTGATGTTCGACCTGGAAGA

Product: citrate lyase subunit gamma

Products: acetate; oxaloacetate

Alternate protein names: Citrate lyase gamma chain [H]

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQANVVVDDKGALECVLRARVQ
AAALRAAQQTQLQWSQL

Sequences:

>Translated_97_residues
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQANVVVDDKGALECVLRARVQ
AAALRAAQQTQLQWSQL
>Mature_97_residues
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQANVVVDDKGALECVLRARVQ
AAALRAAQQTQLQWSQL

Specific function: Covalent carrier of the coenzyme of citrate lyase [H]

COG id: COG3052

COG function: function code C; Citrate lyase, gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitD family [H]

Homologues:

Organism=Escherichia coli, GI1786834, Length=94, Percent_Identity=48.936170212766, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006495
- InterPro:   IPR009662
- ProDom:   PD015389 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: 4.1.3.6

Molecular weight: Translated: 10427; Mature: 10427

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQ
CCEEHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANVVVDDKGALECVLRARVQAAALRAAQQTQLQWSQL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEMKIDALAGTLESSDVMVRIGPAAQPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVKQ
CCEEHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANVVVDDKGALECVLRARVQAAALRAAQQTQLQWSQL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: citrate

Specific reaction: citrate = acetate + oxaloacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA