Click here to switch to the map view.

The map label for this gene is 150398750

Identifier: 150398750

GI number: 150398750

Start: 3774565

End: 3775023

Strand: Direct

Name: 150398750

Synonym: Smed_3567

Alternate gene names: NA

Gene position: 3774565-3775023 (Clockwise)

Preceding gene: 150398748

Following gene: 150398751

Centisome position: 99.81

GC content: 62.09

Gene sequence:

>459_bases
ATGAAACGCGATAGTAGACTTTCCATCACCCTGCATGCGCTGCTTCATATGGCGGAGCGTAAAACCATCACCTCGGAAGA
GCTGGCGGCCTGCCTGTCCACCAACCCCGTCGTGGTCCGGCGCACGATGGCCGGTCTGCGGGAAGCGGGGCTGGTGCGCT
CTGAAAAGGGGCATGGCGGTGGCTGGTCGCTCGCCTGCGACCTCGCAACGGTCAGCCTCGCAGACGTGCATGCCGCTCTC
GGGGAGCCTGCCTTTTTTGCGATCGGCAATCGCACCGAGTCCCCCGGCTGCCTGGTGGAACAGGCCGTCAATGCCGCAAT
GGACGGGGCGCTCCGGGAAGCCGAGCTTCTCCTCCTCCAGCGACTGGGAACGATAAGTCTGGCAGATCTTTCGCGTGATT
TTCAGCAACGGATGGCGCTCGGTCGCCAGAAAACGAAGGAGCAAAATCATGTCGGTTGA

Upstream 100 bases:

>100_bases
CTCGACCGTCTTGCCGCACGCAATTGCGGGCCTAGTTGGTGTGTTGGCCAAAATTTCCAGGCATTGACTTTTTTGAAAAT
CACGTAACATATTGAGTTAC

Downstream 100 bases:

>100_bases
TGCGGCGCCAGTTGATGTAACGATTGTGGGAGGAAGCTATGCGGGTCTTTCCGCGGCATTGCAGCTGGCAAGGGCGAGGC
GCTCCGTGGTGGTCGTCGAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Transcriptional Regulator; Rrf2 Family Protein; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Transcriptional Regulator Badm/Rrf2 Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcriptional Regulator Rrf2 Family; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKRDSRLSITLHALLHMAERKTITSEELAACLSTNPVVVRRTMAGLREAGLVRSEKGHGGGWSLACDLATVSLADVHAAL
GEPAFFAIGNRTESPGCLVEQAVNAAMDGALREAELLLLQRLGTISLADLSRDFQQRMALGRQKTKEQNHVG

Sequences:

>Translated_152_residues
MKRDSRLSITLHALLHMAERKTITSEELAACLSTNPVVVRRTMAGLREAGLVRSEKGHGGGWSLACDLATVSLADVHAAL
GEPAFFAIGNRTESPGCLVEQAVNAAMDGALREAELLLLQRLGTISLADLSRDFQQRMALGRQKTKEQNHVG
>Mature_152_residues
MKRDSRLSITLHALLHMAERKTITSEELAACLSTNPVVVRRTMAGLREAGLVRSEKGHGGGWSLACDLATVSLADVHAAL
GEPAFFAIGNRTESPGCLVEQAVNAAMDGALREAELLLLQRLGTISLADLSRDFQQRMALGRQKTKEQNHVG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16374; Mature: 16374

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRDSRLSITLHALLHMAERKTITSEELAACLSTNPVVVRRTMAGLREAGLVRSEKGHGG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
GWSLACDLATVSLADVHAALGEPAFFAIGNRTESPGCLVEQAVNAAMDGALREAELLLLQ
CCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLGTISLADLSRDFQQRMALGRQKTKEQNHVG
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRDSRLSITLHALLHMAERKTITSEELAACLSTNPVVVRRTMAGLREAGLVRSEKGHGG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
GWSLACDLATVSLADVHAALGEPAFFAIGNRTESPGCLVEQAVNAAMDGALREAELLLLQ
CCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLGTISLADLSRDFQQRMALGRQKTKEQNHVG
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA