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The map label for this gene is gfo [H]

Identifier: 150398590

GI number: 150398590

Start: 3609167

End: 3610231

Strand: Reverse

Name: gfo [H]

Synonym: Smed_3401

Alternate gene names: 150398590

Gene position: 3610231-3609167 (Counterclockwise)

Preceding gene: 150398591

Following gene: 150398589

Centisome position: 95.46

GC content: 62.44

Gene sequence:

>1065_bases
GTGAATCCATCCGCATCCCCGATTCGCGTGCTCAGCGCCGGCCTCGGCAATATGGGCCGCAGCCACGCGCTCGCCTATCA
TCAGAACCCCGGCTTCGAAGTCGCCGGGCTCGTCAACCGCTCGAAAGTGTCACTGCCCGAGGAACTTGCGGCATACGAGA
TTCTGCCGTCGTTCCCGGAGGCGCTGGCTGCGCTGAAGCCGGAGCTCTGCTCGATCAACACCTATTCGGACACACATGCC
GATTATGCCGTGATGGCTATGGAGGCGGGAGCGCATGTCTTCGTCGAGAAGCCGCTGGCAACGACGGTCGCCGATGCCAA
GCGCGTCGTCGCCTGCGCGCGGGCCAATGGCCGTAAGCTGGTCGTCGGCTATATCCTGCGGCACCATCCGTCCTGGATGC
GGCTGATCGCGGAAGGGCGCAAGCTCGGAGGCCCCTACGTCTTCCGGATGAATCTGAACCAGCAATCGAGCGGGCAGACC
TGGGCAACGCACAAATCATTGATGCAGACCACGTCGCCCATCGTCGACTGCGGCGTGCACTATGTCGACGTGATGTGCCA
GATCACGGACGCAAAGCCTGTGGAAGTAAGAGGCATGGGCCTGAGGCTCACGGACGAGATCGCCGCCGACATGTATAATT
ACGGGCATCTGCAGGTGATCTTCGACGATGGCTCGATCGGCTGGTACGAAGCGGGCTGGGGGCCGATGATCTCGGAGACG
GCCTTCTTCGTGAAGGACGTAATGTCCCCAAACGGCTCGGTGTCCATCGTCATGGATCAGAACGCCAGGTCAGACGACAT
CGACGTGCACACGAAAACCTCCGTCATCCGCGTGCACAGCGCCGCGACGGGCCCGGACGGCAGGTTCCTGAAGCGCGACG
CGGACCTGATGATGGAGGGCGAGCCGGGCCACCAGGAGCTTTGCGAGCGCGAACAGGACTTCGTGCTCAGGGCCATCCGG
AGCGATATCGATCTCGACCGGCACATGGACGATGCGGTGCAGTCGCTGAAGATCTGCCTCGCCGCGGATGAAAGTGTGCG
CACCGGCAAGCCGGTCAAGCTTTAA

Upstream 100 bases:

>100_bases
CAGTTCTCTCGGCACTGTCGCTGGCGATCTTCCCGGTGCTCGTCCTCTACGTCATCTTCTCGCGGCAACTGATCCGCGGC
ATCACGGCAGGAGCAGTCAA

Downstream 100 bases:

>100_bases
CCCAAGAGGGCGACACGTGGGATCACTTCAACTCAAATCCATCCGCAAGGCCTTCGGCAGCCATGAGGTGCTGAAGGGAA
TCGACCTCGACGTGAAGGAC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: GFOR [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNPSASPIRVLSAGLGNMGRSHALAYHQNPGFEVAGLVNRSKVSLPEELAAYEILPSFPEALAALKPELCSINTYSDTHA
DYAVMAMEAGAHVFVEKPLATTVADAKRVVACARANGRKLVVGYILRHHPSWMRLIAEGRKLGGPYVFRMNLNQQSSGQT
WATHKSLMQTTSPIVDCGVHYVDVMCQITDAKPVEVRGMGLRLTDEIAADMYNYGHLQVIFDDGSIGWYEAGWGPMISET
AFFVKDVMSPNGSVSIVMDQNARSDDIDVHTKTSVIRVHSAATGPDGRFLKRDADLMMEGEPGHQELCEREQDFVLRAIR
SDIDLDRHMDDAVQSLKICLAADESVRTGKPVKL

Sequences:

>Translated_354_residues
MNPSASPIRVLSAGLGNMGRSHALAYHQNPGFEVAGLVNRSKVSLPEELAAYEILPSFPEALAALKPELCSINTYSDTHA
DYAVMAMEAGAHVFVEKPLATTVADAKRVVACARANGRKLVVGYILRHHPSWMRLIAEGRKLGGPYVFRMNLNQQSSGQT
WATHKSLMQTTSPIVDCGVHYVDVMCQITDAKPVEVRGMGLRLTDEIAADMYNYGHLQVIFDDGSIGWYEAGWGPMISET
AFFVKDVMSPNGSVSIVMDQNARSDDIDVHTKTSVIRVHSAATGPDGRFLKRDADLMMEGEPGHQELCEREQDFVLRAIR
SDIDLDRHMDDAVQSLKICLAADESVRTGKPVKL
>Mature_354_residues
MNPSASPIRVLSAGLGNMGRSHALAYHQNPGFEVAGLVNRSKVSLPEELAAYEILPSFPEALAALKPELCSINTYSDTHA
DYAVMAMEAGAHVFVEKPLATTVADAKRVVACARANGRKLVVGYILRHHPSWMRLIAEGRKLGGPYVFRMNLNQQSSGQT
WATHKSLMQTTSPIVDCGVHYVDVMCQITDAKPVEVRGMGLRLTDEIAADMYNYGHLQVIFDDGSIGWYEAGWGPMISET
AFFVKDVMSPNGSVSIVMDQNARSDDIDVHTKTSVIRVHSAATGPDGRFLKRDADLMMEGEPGHQELCEREQDFVLRAIR
SDIDLDRHMDDAVQSLKICLAADESVRTGKPVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008354
- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: =1.1.99.28 [H]

Molecular weight: Translated: 38842; Mature: 38842

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSASPIRVLSAGLGNMGRSHALAYHQNPGFEVAGLVNRSKVSLPEELAAYEILPSFPE
CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHH
ALAALKPELCSINTYSDTHADYAVMAMEAGAHVFVEKPLATTVADAKRVVACARANGRKL
HHHHCCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCEE
VVGYILRHHPSWMRLIAEGRKLGGPYVFRMNLNQQSSGQTWATHKSLMQTTSPIVDCGVH
EEEHHHHCCHHHHHHHHCCHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHH
YVDVMCQITDAKPVEVRGMGLRLTDEIAADMYNYGHLQVIFDDGSIGWYEAGWGPMISET
EEEEEEEECCCCCEEEECCCEEEHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCHHHH
AFFVKDVMSPNGSVSIVMDQNARSDDIDVHTKTSVIRVHSAATGPDGRFLKRDADLMMEG
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCEEECCCCEEECC
EPGHQELCEREQDFVLRAIRSDIDLDRHMDDAVQSLKICLAADESVRTGKPVKL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHEECCCCCCCCCCCCC
>Mature Secondary Structure
MNPSASPIRVLSAGLGNMGRSHALAYHQNPGFEVAGLVNRSKVSLPEELAAYEILPSFPE
CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHH
ALAALKPELCSINTYSDTHADYAVMAMEAGAHVFVEKPLATTVADAKRVVACARANGRKL
HHHHCCCCCEEECCCCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCEE
VVGYILRHHPSWMRLIAEGRKLGGPYVFRMNLNQQSSGQTWATHKSLMQTTSPIVDCGVH
EEEHHHHCCHHHHHHHHCCHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHH
YVDVMCQITDAKPVEVRGMGLRLTDEIAADMYNYGHLQVIFDDGSIGWYEAGWGPMISET
EEEEEEEECCCCCEEEECCCEEEHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCHHHH
AFFVKDVMSPNGSVSIVMDQNARSDDIDVHTKTSVIRVHSAATGPDGRFLKRDADLMMEG
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCEEEEEECCCCCCCCCEEECCCCEEECC
EPGHQELCEREQDFVLRAIRSDIDLDRHMDDAVQSLKICLAADESVRTGKPVKL
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537789; 8472911; 8994968 [H]