Click here to switch to the map view.

The map label for this gene is 150398486

Identifier: 150398486

GI number: 150398486

Start: 3488550

End: 3489287

Strand: Reverse

Name: 150398486

Synonym: Smed_3296

Alternate gene names: NA

Gene position: 3489287-3488550 (Counterclockwise)

Preceding gene: 150398487

Following gene: 150398485

Centisome position: 92.26

GC content: 64.63

Gene sequence:

>738_bases
ATGATCACCACAATTGCTTTCTCTGCCTTCGCAATAGCATCAGGCATATGGATGAGCGTGCGCGCCGTCCGCGACCACCG
GGCGGCCATGGCCGAACGCCGGGGTCTACTCGACGACGCGGCACGGCTCCTCAGGGACGCTCGCATCACCTTCAGCGCAG
ACCATTTTCCGATCCTCGCCGGCAGCCTGGCCGACGGACGGCAGATACGCGCTGAACTCATCGTCGACACCATGGTCTGC
CGCCGATTGCCGCAATTGTGGCTGAAGCTGACCCTGTTCGAAACCATTCTCCGTGCCAGACCCAGGATCGGGGCGCTGGC
GCGGCCGACCGGCGCCGAGTTCTACTCGATCGTCCATGAAATGCCGCGTCTGCTCATGCCGCCGCCCGGCGATACCGCCC
TCCTGATGCGCGGCGACGGCAACGCCTCCGACCGGCAGGTCGAACGGACCGCGGCCATGTTTGCGAGCCTGTTTTCCGAT
CGGACGCTCAAGGAAGCGGCTATCACTCCGCGCGGCGTGCGGCTCGTCCGCCAGGCGGACGAAGGACAACGCGCGGCGCA
TCTGCTCCTGCGGCAGGCGCGCTTTTCCGTCACCGCGATTGCGCCTGAGATCATACGGCGGACAATCGCCGAAGCGGAGG
TACTGAGCGGCTTCCTGGCGGATGATGAAGCCGTTCCGGGTCGGAGGGACTTCAGAAAAAATGCGCAGCGGTTTCTGTTT
CAGGCCGATCCGACCTGA

Upstream 100 bases:

>100_bases
GAGCCGCCGACCTTCGGAGGGCGTGCACCCGATTCGGATCGTGCGCTCCCCTTCTTGAAACCGACCGGAGCGCTTCCCGC
GTCAAAAGCAGGGCGATTGC

Downstream 100 bases:

>100_bases
AGCATCGTGCTCCGGCCGGTTGAGGAGGATCACCATGGCCAAGCCTATCAATCCCTTTCTGGTGCTGATGCTGGCGACAG
TGCTGCCTGGTGCCGGCCAT

Product: putative signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MITTIAFSAFAIASGIWMSVRAVRDHRAAMAERRGLLDDAARLLRDARITFSADHFPILAGSLADGRQIRAELIVDTMVC
RRLPQLWLKLTLFETILRARPRIGALARPTGAEFYSIVHEMPRLLMPPPGDTALLMRGDGNASDRQVERTAAMFASLFSD
RTLKEAAITPRGVRLVRQADEGQRAAHLLLRQARFSVTAIAPEIIRRTIAEAEVLSGFLADDEAVPGRRDFRKNAQRFLF
QADPT

Sequences:

>Translated_245_residues
MITTIAFSAFAIASGIWMSVRAVRDHRAAMAERRGLLDDAARLLRDARITFSADHFPILAGSLADGRQIRAELIVDTMVC
RRLPQLWLKLTLFETILRARPRIGALARPTGAEFYSIVHEMPRLLMPPPGDTALLMRGDGNASDRQVERTAAMFASLFSD
RTLKEAAITPRGVRLVRQADEGQRAAHLLLRQARFSVTAIAPEIIRRTIAEAEVLSGFLADDEAVPGRRDFRKNAQRFLF
QADPT
>Mature_245_residues
MITTIAFSAFAIASGIWMSVRAVRDHRAAMAERRGLLDDAARLLRDARITFSADHFPILAGSLADGRQIRAELIVDTMVC
RRLPQLWLKLTLFETILRARPRIGALARPTGAEFYSIVHEMPRLLMPPPGDTALLMRGDGNASDRQVERTAAMFASLFSD
RTLKEAAITPRGVRLVRQADEGQRAAHLLLRQARFSVTAIAPEIIRRTIAEAEVLSGFLADDEAVPGRRDFRKNAQRFLF
QADPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27289; Mature: 27289

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTIAFSAFAIASGIWMSVRAVRDHRAAMAERRGLLDDAARLLRDARITFSADHFPILA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCEEE
GSLADGRQIRAELIVDTMVCRRLPQLWLKLTLFETILRARPRIGALARPTGAEFYSIVHE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
MPRLLMPPPGDTALLMRGDGNASDRQVERTAAMFASLFSDRTLKEAAITPRGVRLVRQAD
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHC
EGQRAAHLLLRQARFSVTAIAPEIIRRTIAEAEVLSGFLADDEAVPGRRDFRKNAQRFLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
QADPT
CCCCC
>Mature Secondary Structure
MITTIAFSAFAIASGIWMSVRAVRDHRAAMAERRGLLDDAARLLRDARITFSADHFPILA
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCEEE
GSLADGRQIRAELIVDTMVCRRLPQLWLKLTLFETILRARPRIGALARPTGAEFYSIVHE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
MPRLLMPPPGDTALLMRGDGNASDRQVERTAAMFASLFSDRTLKEAAITPRGVRLVRQAD
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHC
EGQRAAHLLLRQARFSVTAIAPEIIRRTIAEAEVLSGFLADDEAVPGRRDFRKNAQRFLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
QADPT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA