| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398485
Identifier: 150398485
GI number: 150398485
Start: 3488252
End: 3488515
Strand: Reverse
Name: 150398485
Synonym: Smed_3295
Alternate gene names: NA
Gene position: 3488515-3488252 (Counterclockwise)
Preceding gene: 150398486
Following gene: 150398479
Centisome position: 92.24
GC content: 61.36
Gene sequence:
>264_bases ATGGCCAAGCCTATCAATCCCTTTCTGGTGCTGATGCTGGCGACAGTGCTGCCTGGTGCCGGCCATGTCGCCATACGCGA TGCGACCCGCGGCTTGGCCTTTGCCTTTTTCGTCGTATTCTTTTCCGTCGTCACTTACATGACCGCGCCTCCGGACCGCT CCTTCATCGGGCGGCATGCAGGCGGACTGTTCGTCTGGGCACTGTCGATCCCCGATGCCTATCGCCGTGCGCGCGTCCGC ACAGTCATGGCCCGAAAAAGCTGA
Upstream 100 bases:
>100_bases GTTCCGGGTCGGAGGGACTTCAGAAAAAATGCGCAGCGGTTTCTGTTTCAGGCCGATCCGACCTGAAGCATCGTGCTCCG GCCGGTTGAGGAGGATCACC
Downstream 100 bases:
>100_bases AACTACAGCGCCGTGCGTCTTATAAGACGCACAAAGGTCGCTGTAGCACTTTGATCTGCTGCATGTTTTTGTCCTTCAAT CGGATCCGATTAAAGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAKPINPFLVLMLATVLPGAGHVAIRDATRGLAFAFFVVFFSVVTYMTAPPDRSFIGRHAGGLFVWALSIPDAYRRARVR TVMARKS
Sequences:
>Translated_87_residues MAKPINPFLVLMLATVLPGAGHVAIRDATRGLAFAFFVVFFSVVTYMTAPPDRSFIGRHAGGLFVWALSIPDAYRRARVR TVMARKS >Mature_86_residues AKPINPFLVLMLATVLPGAGHVAIRDATRGLAFAFFVVFFSVVTYMTAPPDRSFIGRHAGGLFVWALSIPDAYRRARVRT VMARKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9568; Mature: 9436
Theoretical pI: Translated: 12.22; Mature: 12.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPINPFLVLMLATVLPGAGHVAIRDATRGLAFAFFVVFFSVVTYMTAPPDRSFIGRHA CCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC GGLFVWALSIPDAYRRARVRTVMARKS CCEEEEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AKPINPFLVLMLATVLPGAGHVAIRDATRGLAFAFFVVFFSVVTYMTAPPDRSFIGRHA CCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC GGLFVWALSIPDAYRRARVRTVMARKS CCEEEEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA