| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is fxsA [C]
Identifier: 150398407
GI number: 150398407
Start: 3389549
End: 3390097
Strand: Reverse
Name: fxsA [C]
Synonym: Smed_3215
Alternate gene names: 150398407
Gene position: 3390097-3389549 (Counterclockwise)
Preceding gene: 150398413
Following gene: 150398406
Centisome position: 89.64
GC content: 62.3
Gene sequence:
>549_bases ATGCGTTTCCTGATCCCGCTCCTCATTCTCGGGCTGCCGCTCGCCGAAATCGCCGGCTTCGTTGCCGTCGGACGCGAAAT CGGCGTGGCGATGACACTTCTCCTTGTTTTCTTAAGCGCCATCGCCGGCATCATGCTCCTGCGCATCCAAGGATTCAGCG TACTCCGGCGCGTGCAGGAAGCGGCCCGAACGGGCATTGATCCCGGGCTCGACGTCCTCGGAGGCGTGCTGGTGTTCATC GCCGCAATTCTTTTGATCGTGCCGGGCTTCATCAGCGACATTCTCGGCGTCTTCATCTTCCTGCCCCCGGTCCGTCGCGC CGTCGCTGCCTTTCTGCGCAGCCGGATAACGATATTGAGCAGCGCCCCCGGATACGGATCCTCCAATCCTCAATCCTCTG GTCCCCACTCCACTGACCCCGGATCTTCGGGACCTCGGCGGGAGGACCGCCGCGGGCCGCTGATCATTGATCTCGAGGAG GACGAATTCTCGCGCAAGAAGAAGGACGAGGACGGGCCAGAGCCACCGACGAACCGTCTGTCTCGCTAA
Upstream 100 bases:
>100_bases TGTTCCATATAGTCTGGAAGGATAGACCATTCAAACGACGATGTCGCACCCATAAACCGGAGACCGGATAATTGCACTCA CCTTCTTGCGAGCACGGACG
Downstream 100 bases:
>100_bases ATCGCCTTGCCTCGGAGCCGGGCCACGAGGGTTGTAAGCCAAAGTCCGAGATGCTAGATGGCCTCACCATTTCGAAGTCC GAGGAAACTCTTATGACGAC
Product: FxsA cytoplasmic membrane protein
Products: NA
Alternate protein names: FxsA Protein; F Exclusion Suppressor
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRFLIPLLILGLPLAEIAGFVAVGREIGVAMTLLLVFLSAIAGIMLLRIQGFSVLRRVQEAARTGIDPGLDVLGGVLVFI AAILLIVPGFISDILGVFIFLPPVRRAVAAFLRSRITILSSAPGYGSSNPQSSGPHSTDPGSSGPRREDRRGPLIIDLEE DEFSRKKKDEDGPEPPTNRLSR
Sequences:
>Translated_182_residues MRFLIPLLILGLPLAEIAGFVAVGREIGVAMTLLLVFLSAIAGIMLLRIQGFSVLRRVQEAARTGIDPGLDVLGGVLVFI AAILLIVPGFISDILGVFIFLPPVRRAVAAFLRSRITILSSAPGYGSSNPQSSGPHSTDPGSSGPRREDRRGPLIIDLEE DEFSRKKKDEDGPEPPTNRLSR >Mature_182_residues MRFLIPLLILGLPLAEIAGFVAVGREIGVAMTLLLVFLSAIAGIMLLRIQGFSVLRRVQEAARTGIDPGLDVLGGVLVFI AAILLIVPGFISDILGVFIFLPPVRRAVAAFLRSRITILSSAPGYGSSNPQSSGPHSTDPGSSGPRREDRRGPLIIDLEE DEFSRKKKDEDGPEPPTNRLSR
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19536; Mature: 19536
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLIPLLILGLPLAEIAGFVAVGREIGVAMTLLLVFLSAIAGIMLLRIQGFSVLRRVQE CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTGIDPGLDVLGGVLVFIAAILLIVPGFISDILGVFIFLPPVRRAVAAFLRSRITILS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAPGYGSSNPQSSGPHSTDPGSSGPRREDRRGPLIIDLEEDEFSRKKKDEDGPEPPTNRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCC SR CC >Mature Secondary Structure MRFLIPLLILGLPLAEIAGFVAVGREIGVAMTLLLVFLSAIAGIMLLRIQGFSVLRRVQE CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTGIDPGLDVLGGVLVFIAAILLIVPGFISDILGVFIFLPPVRRAVAAFLRSRITILS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAPGYGSSNPQSSGPHSTDPGSSGPRREDRRGPLIIDLEEDEFSRKKKDEDGPEPPTNRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCC SR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA