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The map label for this gene is parB [H]

Identifier: 150398393

GI number: 150398393

Start: 3375491

End: 3376381

Strand: Reverse

Name: parB [H]

Synonym: Smed_3201

Alternate gene names: 150398393

Gene position: 3376381-3375491 (Counterclockwise)

Preceding gene: 150398394

Following gene: 150398389

Centisome position: 89.28

GC content: 60.83

Gene sequence:

>891_bases
ATGAACGATGACAGCTCCAAGCGACGTCTTGGTCGTGGCCTAGCAGCGTTAATCGGGGAAATGGACCAGCCGTTGCAAAC
CGGCAGTGCTCCCGTCTCTCCGGTCAGCGCGGACCGGCGTATCCCGATAGAGTTCGTTTCCCGCAATCCTCGTAACCCTC
GGCGGCAGTTTGACGAGGCTGAGCTCCAGGACCTCGCAAGCTCGATCCGTCAGCACGGGATCGTCCAGCCAGTCGTCGTC
CGCACGATTGGGTCCGACCGCTATGAAATTATTGCAGGCGAACGGCGCTGGAGGGCGGCGCAGCTTGCAGGCTTCACCGA
AATACCTGTTATCGTGCGCGATGTGGACGACAGGACGGCGCTTGAGATTGCGATTGTCGAGAATGTCCAGCGGTCCGACC
TCAATCCCCTCGAAGAGGCGCTTGGCTACGAACAGCTGATCGCGGAGCATGGATACACGCAGAACGATCTCGGCGATATC
ATCGGCAAGAGCCGGAGCCATGTTGCGAACAGCCTGCGCCTGCTAAAACTGCCGGAGCCAGTCCGCGATATGCTGTCCGA
CGGCAGCCTCTCCGCCGGCCATGCCCGTGCGCTCATACCCACCTCCGACCCGGTCGCATTGGCGCGCGCAGTGGTGGCAA
AGGGACTTTCGGTCCGCGAAGTCGAGAGGTTGGCGCAGAACGACATAAGGTCGCAGAACGATCCCAATTATGCGAAAGCG
CGCCAGCGCGATGAGAAGGACGCCGATACACTGGCCTTGGAGCGGACCTTGTCGGATAGTCTCGGCCTCGAGGTGACCGT
CAACCACAAGGCCAGTGGTGGCCACCTCAAGATCACGTATAAGACGCTCGATCAGCTGGAAGAGATCTGCAGGCTGCTCG
AGCGGCGCTGA

Upstream 100 bases:

>100_bases
GAAGTCAGGCCTATCTGCAGCTTGCCTCGGAAGTGATTCAACGCGAGAGGCAGCGGAAGGCTGCCTGACCGTTTCGGAAC
CGTAATTAATCAGGTGTCAG

Downstream 100 bases:

>100_bases
AGCGTGGCGCGGCGGCGTTGGTGGGTCCCGGAACTCAGCGCCGAGCCGACTGGATCGTAATCGCCAGCAAATTCTGTATC
ACAAGGCTCTCCTCGAGGCT

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPVSADRRIPIEFVSRNPRNPRRQFDEAELQDLASSIRQHGIVQPVVV
RTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRTALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDI
IGKSRSHVANSLRLLKLPEPVRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAKA
RQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLLERR

Sequences:

>Translated_296_residues
MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPVSADRRIPIEFVSRNPRNPRRQFDEAELQDLASSIRQHGIVQPVVV
RTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRTALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDI
IGKSRSHVANSLRLLKLPEPVRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAKA
RQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLLERR
>Mature_296_residues
MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPVSADRRIPIEFVSRNPRNPRRQFDEAELQDLASSIRQHGIVQPVVV
RTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRTALEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDI
IGKSRSHVANSLRLLKLPEPVRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAKA
RQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLLERR

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32841; Mature: 32841

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPVSADRRIPIEFVSRNPRNPRRQFDEA
CCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCHH
ELQDLASSIRQHGIVQPVVVRTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRTA
HHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCHH
LEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDIIGKSRSHVANSLRLLKLPEP
EEHHHHHHHHHCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHEEECCHH
VRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAKA
HHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
RQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLLERR
HHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDDSSKRRLGRGLAALIGEMDQPLQTGSAPVSPVSADRRIPIEFVSRNPRNPRRQFDEA
CCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCHH
ELQDLASSIRQHGIVQPVVVRTIGSDRYEIIAGERRWRAAQLAGFTEIPVIVRDVDDRTA
HHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCHH
LEIAIVENVQRSDLNPLEEALGYEQLIAEHGYTQNDLGDIIGKSRSHVANSLRLLKLPEP
EEHHHHHHHHHCCCCHHHHHHCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHEEECCHH
VRDMLSDGSLSAGHARALIPTSDPVALARAVVAKGLSVREVERLAQNDIRSQNDPNYAKA
HHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH
RQRDEKDADTLALERTLSDSLGLEVTVNHKASGGHLKITYKTLDQLEEICRLLERR
HHHCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]