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The map label for this gene is 150398362

Identifier: 150398362

GI number: 150398362

Start: 3331901

End: 3333145

Strand: Reverse

Name: 150398362

Synonym: Smed_3170

Alternate gene names: NA

Gene position: 3333145-3331901 (Counterclockwise)

Preceding gene: 150398363

Following gene: 150398361

Centisome position: 88.13

GC content: 61.61

Gene sequence:

>1245_bases
ATGCGCAAGTTCATGACGACGACTGCTGTTGCAGCATTGATGCTGGCGGCTACGGCCGCGCGCGCTGCCGAGAATGTGGA
AGTATTGCACTGGTGGACGTCAGGCGGCGAAGCCGCGGCCCTCGACGTCCTTAAGAAGGATCTGGAGAGCAAAGGCATCA
GCTGGACCGACATGCCGGTCGCCGGCGGCGGCGGCACCGAAGCCATGACGGTGCTTCGTGCCCGTGTCACAGCGGGCAAT
GCACCGACGGCCGTGCAGATGCTCGGCTTCGACATTCTCGATTGGGCAAAAGAAGGCGCACTCGGCAATCTGGACGAGGT
CGCCGCCAAAGAAGGCTGGGACAAGGTCATCCCCGCCGCCCTGCAGCAGTTCTCGAAATTCGACGGCCACTGGATTGCCG
CGCCGGTGAACGTCCACTCGACGAACTGGGTCTGGATCAACAAGGCCGCGCTCGACAAGGCCGGCGCCAAGGAGCCGACG
ACCTGGGAAGAGTTGATCGCACTGCTCGACAAGTTCAAGGAGCAGGGCATCACCCCGATCGCTCATGGCGGGCAGCCCTG
GCAGGATGCCACGATCTTCGACGCTGTGGTTCTTTCGCTCGGCACCGACTTCTACAAGCAGGCCTTCATCGACCTCGATC
CGGCAGCGCTCGGAGGCGACAAGATGAAGGAAGCTTTTAACCGGATGACGAAGCTGCGCTCCTATGTGGACGACAACTTC
TCCGGCCGCGACTGGAACCTCGCCTCGGCGATGGTCATCGAGAACAAGGCCGGCCTTCAGTTCATGGGGGACTGGGCGAA
GGGCGAATTCCTGAAGGCGAACAAGGTGCCCGGCACCGATTTCGTCTGCATGCGCTACCCGGGGACTCAAGGCTCCGTAA
CCTTCAACTCCGACCAGTTCGCAATGTTCAAGGTTTCCGAGGACAAGGTCCCGGCGCAGCTGCAGATGGCCACGGCGATC
GAGAGCCCGGCCTTCCAGTCGGCGTTCAATGTCGTCAAGGGGTCTGTTCCCGCCCGCACCGACGTTCCCGATACCGATTT
CGACGCCTGCGGCAAGAAGGGCATCAAGGACCTCGCGGAAGCCAATACCAACGGCACGCTCTTTGGATCCATGGCGCATG
GTCATGCCAATCCGGCGTCTGTCAAAAATGCGATCTACGACGTGGTCACGCGCCAGTTCAACGGCGAACTCAGCTCGGAG
GAGGCAGTCACGGAACTCGTCGCTGCTGTCGAAGGCGCGAAGTAA

Upstream 100 bases:

>100_bases
GATCTCGGTCATGATTTCATGTCGTTCCGACCTGAAATCATCATGATCCAGGAAGGGCGGAGGAGGTTCCGCCTCAGTAA
CTTGCAAACGGGAGGATACG

Downstream 100 bases:

>100_bases
GGCGTGCGGCCCCTCTGCTCGGGTTCTACCCGAGGACTGACCCTCTCCCCGCCCGCGGGGGAGAGGGGACGAAGGTGGTG
CGGCATCTCCCTTCTCCCCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAALDVLKKDLESKGISWTDMPVAGGGGTEAMTVLRARVTAGN
APTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPAALQQFSKFDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPT
TWEELIALLDKFKEQGITPIAHGGQPWQDATIFDAVVLSLGTDFYKQAFIDLDPAALGGDKMKEAFNRMTKLRSYVDDNF
SGRDWNLASAMVIENKAGLQFMGDWAKGEFLKANKVPGTDFVCMRYPGTQGSVTFNSDQFAMFKVSEDKVPAQLQMATAI
ESPAFQSAFNVVKGSVPARTDVPDTDFDACGKKGIKDLAEANTNGTLFGSMAHGHANPASVKNAIYDVVTRQFNGELSSE
EAVTELVAAVEGAK

Sequences:

>Translated_414_residues
MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAALDVLKKDLESKGISWTDMPVAGGGGTEAMTVLRARVTAGN
APTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPAALQQFSKFDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPT
TWEELIALLDKFKEQGITPIAHGGQPWQDATIFDAVVLSLGTDFYKQAFIDLDPAALGGDKMKEAFNRMTKLRSYVDDNF
SGRDWNLASAMVIENKAGLQFMGDWAKGEFLKANKVPGTDFVCMRYPGTQGSVTFNSDQFAMFKVSEDKVPAQLQMATAI
ESPAFQSAFNVVKGSVPARTDVPDTDFDACGKKGIKDLAEANTNGTLFGSMAHGHANPASVKNAIYDVVTRQFNGELSSE
EAVTELVAAVEGAK
>Mature_414_residues
MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAALDVLKKDLESKGISWTDMPVAGGGGTEAMTVLRARVTAGN
APTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPAALQQFSKFDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPT
TWEELIALLDKFKEQGITPIAHGGQPWQDATIFDAVVLSLGTDFYKQAFIDLDPAALGGDKMKEAFNRMTKLRSYVDDNF
SGRDWNLASAMVIENKAGLQFMGDWAKGEFLKANKVPGTDFVCMRYPGTQGSVTFNSDQFAMFKVSEDKVPAQLQMATAI
ESPAFQSAFNVVKGSVPARTDVPDTDFDACGKKGIKDLAEANTNGTLFGSMAHGHANPASVKNAIYDVVTRQFNGELSSE
EAVTELVAAVEGAK

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44508; Mature: 44508

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAALDVLKKDLESKGISWTDMPV
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
AGGGGTEAMTVLRARVTAGNAPTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPAA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
LQQFSKFDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPTTWEELIALLDKFKEQGITPI
HHHHHHCCCCEEEEEEEECCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
AHGGQPWQDATIFDAVVLSLGTDFYKQAFIDLDPAALGGDKMKEAFNRMTKLRSYVDDNF
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCC
SGRDWNLASAMVIENKAGLQFMGDWAKGEFLKANKVPGTDFVCMRYPGTQGSVTFNSDQF
CCCCCCCEEEEEEECCCCCEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCEEECCCCE
AMFKVSEDKVPAQLQMATAIESPAFQSAFNVVKGSVPARTDVPDTDFDACGKKGIKDLAE
EEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ANTNGTLFGSMAHGHANPASVKNAIYDVVTRQFNGELSSEEAVTELVAAVEGAK
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKFMTTTAVAALMLAATAARAAENVEVLHWWTSGGEAAALDVLKKDLESKGISWTDMPV
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
AGGGGTEAMTVLRARVTAGNAPTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPAA
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
LQQFSKFDGHWIAAPVNVHSTNWVWINKAALDKAGAKEPTTWEELIALLDKFKEQGITPI
HHHHHHCCCCEEEEEEEECCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
AHGGQPWQDATIFDAVVLSLGTDFYKQAFIDLDPAALGGDKMKEAFNRMTKLRSYVDDNF
CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHCCCC
SGRDWNLASAMVIENKAGLQFMGDWAKGEFLKANKVPGTDFVCMRYPGTQGSVTFNSDQF
CCCCCCCEEEEEEECCCCCEEEECCCCCCEEECCCCCCCCEEEEECCCCCCCEEECCCCE
AMFKVSEDKVPAQLQMATAIESPAFQSAFNVVKGSVPARTDVPDTDFDACGKKGIKDLAE
EEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ANTNGTLFGSMAHGHANPASVKNAIYDVVTRQFNGELSSEEAVTELVAAVEGAK
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]