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The map label for this gene is ugpA [C]

Identifier: 150398361

GI number: 150398361

Start: 3330851

End: 3331729

Strand: Reverse

Name: ugpA [C]

Synonym: Smed_3169

Alternate gene names: 150398361

Gene position: 3331729-3330851 (Counterclockwise)

Preceding gene: 150398362

Following gene: 150398360

Centisome position: 88.1

GC content: 58.36

Gene sequence:

>879_bases
ATGGACAGCCGCAGCCGGCTGCAGGAGCTTTTGCCCAAGCTCGTGCTCGCCCCAAGCTTTCTCATAGTCCTGGTGTTCGT
CTACGGCTTCATAGCCTATACGGGCTTCCTGTCGGTGACGGACAGCAAGATGCTGCCGTCCTACAATTTCGTGGGTTTAA
GCAACTACAGCCGGCTTTGGGCCTTGCCGCATTGGTGGCGTGCCGTCAGCAATCTTGCGATATTCGCGACGCTCTACATC
GCCATCTGCTCGGTATTGGGTCTGGCGCTCGCGATCCTGCTCGACCAGAAGATCCGGGCCGAAGGTTTTCTGAGGCCGGT
TTATCTTTACCCCATGGCGCTGTCCTTCATCGTCACCGGCACGGCGTGGAAATGGTTCCTCGATCCCGGCATCGGACTTG
AAAACACGATGCACCTCTGGGGCTGGGAAAGTTTCTCCTTCAACTGGATCAAGGACCGCAATTACGCGATCTATTGCGTC
GTGATCGCCGCCGTCTGGCAGTCCACCGGCTTCATAATGGCTATGTTCCTCGCGGGGCTGCGCGGCGTCGACAACGAGAT
CATCAAGGCCGCACAGATCGACGGAGCGACGACGCCGACGATCTACCGGCGGATCATCATCCCGCTTATGCGACCGGTCT
TTCTTTCCGCTTTCGTCGTTCTCGCCCATCTCGCCATCAAGGCCTACGACCTGATTATTGCGCTCACCGGCGGCGGGCCT
GGGCAGGCGACCGAACTCCCGGCGACCTTCATGTATTCCTACACCTTCACCCGCAACCAGATGGCGATCGGCGCCTCGTC
GGCGATCATCATGCTGGTGATGATCTTCTCGATCATCGTCCCCTATCTCTATTCCGAAATCCGGGGAGGAAAAGGCTGA

Upstream 100 bases:

>100_bases
AAGGTGGTGCGGCATCTCCCTTCTCCCCGCCTGCGGGGAGAAGGTGCCGGCAGGCGGATGAGGGGCAGCCCTCCACAAGC
GAAACATAGGTGGTAAAAAT

Downstream 100 bases:

>100_bases
TGGGCGCTCCCAGTCCCGAGAACGTCATCTCGCACAACCGCCTGACGCGGGCGCTGATCTATTCGGCGCTGATCCTTTTC
GCACTCTATTCGTTGCTGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDSRSRLQELLPKLVLAPSFLIVLVFVYGFIAYTGFLSVTDSKMLPSYNFVGLSNYSRLWALPHWWRAVSNLAIFATLYI
AICSVLGLALAILLDQKIRAEGFLRPVYLYPMALSFIVTGTAWKWFLDPGIGLENTMHLWGWESFSFNWIKDRNYAIYCV
VIAAVWQSTGFIMAMFLAGLRGVDNEIIKAAQIDGATTPTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLIIALTGGGP
GQATELPATFMYSYTFTRNQMAIGASSAIIMLVMIFSIIVPYLYSEIRGGKG

Sequences:

>Translated_292_residues
MDSRSRLQELLPKLVLAPSFLIVLVFVYGFIAYTGFLSVTDSKMLPSYNFVGLSNYSRLWALPHWWRAVSNLAIFATLYI
AICSVLGLALAILLDQKIRAEGFLRPVYLYPMALSFIVTGTAWKWFLDPGIGLENTMHLWGWESFSFNWIKDRNYAIYCV
VIAAVWQSTGFIMAMFLAGLRGVDNEIIKAAQIDGATTPTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLIIALTGGGP
GQATELPATFMYSYTFTRNQMAIGASSAIIMLVMIFSIIVPYLYSEIRGGKG
>Mature_292_residues
MDSRSRLQELLPKLVLAPSFLIVLVFVYGFIAYTGFLSVTDSKMLPSYNFVGLSNYSRLWALPHWWRAVSNLAIFATLYI
AICSVLGLALAILLDQKIRAEGFLRPVYLYPMALSFIVTGTAWKWFLDPGIGLENTMHLWGWESFSFNWIKDRNYAIYCV
VIAAVWQSTGFIMAMFLAGLRGVDNEIIKAAQIDGATTPTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLIIALTGGGP
GQATELPATFMYSYTFTRNQMAIGASSAIIMLVMIFSIIVPYLYSEIRGGKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=27.1777003484321, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=23.728813559322, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32617; Mature: 32617

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSRSRLQELLPKLVLAPSFLIVLVFVYGFIAYTGFLSVTDSKMLPSYNFVGLSNYSRLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHH
ALPHWWRAVSNLAIFATLYIAICSVLGLALAILLDQKIRAEGFLRPVYLYPMALSFIVTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TAWKWFLDPGIGLENTMHLWGWESFSFNWIKDRNYAIYCVVIAAVWQSTGFIMAMFLAGL
CCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCEEHHHHHHHHHHCCHHHHHHHHHHH
RGVDNEIIKAAQIDGATTPTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLIIALTGGGP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC
GQATELPATFMYSYTFTRNQMAIGASSAIIMLVMIFSIIVPYLYSEIRGGKG
CCCCCCCHHHEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDSRSRLQELLPKLVLAPSFLIVLVFVYGFIAYTGFLSVTDSKMLPSYNFVGLSNYSRLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHH
ALPHWWRAVSNLAIFATLYIAICSVLGLALAILLDQKIRAEGFLRPVYLYPMALSFIVTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TAWKWFLDPGIGLENTMHLWGWESFSFNWIKDRNYAIYCVVIAAVWQSTGFIMAMFLAGL
CCEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCEEHHHHHHHHHHCCHHHHHHHHHHH
RGVDNEIIKAAQIDGATTPTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLIIALTGGGP
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC
GQATELPATFMYSYTFTRNQMAIGASSAIIMLVMIFSIIVPYLYSEIRGGKG
CCCCCCCHHHEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]