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The map label for this gene is ssuA [H]

Identifier: 150398339

GI number: 150398339

Start: 3298164

End: 3299198

Strand: Direct

Name: ssuA [H]

Synonym: Smed_3147

Alternate gene names: 150398339

Gene position: 3298164-3299198 (Clockwise)

Preceding gene: 150398338

Following gene: 150398340

Centisome position: 87.21

GC content: 58.55

Gene sequence:

>1035_bases
ATGAAACACCTAATTGCCGCCATCCTTGCCGCGACGCTTTCGACAGGCACCGCCTGGGCCGAGGATCCCTTGCCCATCCG
CATCGGCGCCGCTTCGGCTGTCGATCATGCTCCGGTCTTCATCGGGGTCGAGAAGGGAATATTCGCCGCACATGGCCTGG
ATGCGGACGTGGTTATGTATCAGTCCGGCGTTGATATGGTGAACGGGCTCATGAACGGGGCGCAGGAAGTCAATGTCATG
GGCTCGGTCCCGTTCCTGTCCGGGATTTCACGCGGGTTTCCCCTTGTCCTGATCGGGCATTTGCACGGTGACCCGAACCG
TACCGACTATTCCGACAACCAATCCGTTATCGCCTCGGCTGAATCGGGCGTCAAAAAAGCCGATATTGCGGCGCTTGCCG
GGAAACGGATCGGCTTGCCGCGCGGTACGGGTGCGGAGGGTTATCTGTTCGGGTTACTGAAATCGGCAGGGCTCAGCGAG
AAGGATGTGCAACTGGTCAATGTGCAGCCGGCAGAGCTGGTGACTGCGCTGACTCAGGGGGACGTTGATGCCATTTCGAT
CTGGCAGCCCTGGGCCGCGACCGCGCTGACGAAAATCGAAGGAACGGTTGAGGTCGTCGCGGGGGGCTGCGCGGGTTGCT
ATGATCCCGGCACGATCCTGACAACCCGCATGGTTGCCACGGAAAAGCCTGAGGAGCTGAAGCGCTTCATGGCTGCCTTC
GCCGAAGCGCAGCAATGGGTGCGTCAGAACCCCGATAAGGCGGCTGAGATAAACACCCGCTGGATTTCGGGCGTCGATGC
CGAAACCATGGCTCTAGCACTGAAGAATATCCCGCTGGATTCGCGCATTTCGGCGCATACCGCCGCAATGTATCAGGAAA
AGACATTGCCGTTTCTGGTTGGTCTCGGCCGGGTCGAAAAAGTATTCGATCCATCGGATTCCATCGACACAAGCTTTCTG
AAGGCCGCGCAGGAAAGCAATCCCAAGGCATTTTCGGATCTGGAACCTATCCCGGAAGACATTCAGGTCAAGTGA

Upstream 100 bases:

>100_bases
GGTTCAGCCAGCGCAGACCCATGTCTGGGAATACACCGCCGATATGAACAGACTCGATAACTAACCGCCATTTTCATGTA
ATTCTGGGAGGAATAAACAC

Downstream 100 bases:

>100_bases
GGCTCAAATCATGAACACGGCCGCACTGACGGGTGGAACGCCCAAGATCTCGATCCGGGATATGACGCTTGTCCATGTGA
ACGAAGAACGGCGGCAATCC

Product: aliphatic sulfonate ABC transporter periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKHLIAAILAATLSTGTAWAEDPLPIRIGAASAVDHAPVFIGVEKGIFAAHGLDADVVMYQSGVDMVNGLMNGAQEVNVM
GSVPFLSGISRGFPLVLIGHLHGDPNRTDYSDNQSVIASAESGVKKADIAALAGKRIGLPRGTGAEGYLFGLLKSAGLSE
KDVQLVNVQPAELVTALTQGDVDAISIWQPWAATALTKIEGTVEVVAGGCAGCYDPGTILTTRMVATEKPEELKRFMAAF
AEAQQWVRQNPDKAAEINTRWISGVDAETMALALKNIPLDSRISAHTAAMYQEKTLPFLVGLGRVEKVFDPSDSIDTSFL
KAAQESNPKAFSDLEPIPEDIQVK

Sequences:

>Translated_344_residues
MKHLIAAILAATLSTGTAWAEDPLPIRIGAASAVDHAPVFIGVEKGIFAAHGLDADVVMYQSGVDMVNGLMNGAQEVNVM
GSVPFLSGISRGFPLVLIGHLHGDPNRTDYSDNQSVIASAESGVKKADIAALAGKRIGLPRGTGAEGYLFGLLKSAGLSE
KDVQLVNVQPAELVTALTQGDVDAISIWQPWAATALTKIEGTVEVVAGGCAGCYDPGTILTTRMVATEKPEELKRFMAAF
AEAQQWVRQNPDKAAEINTRWISGVDAETMALALKNIPLDSRISAHTAAMYQEKTLPFLVGLGRVEKVFDPSDSIDTSFL
KAAQESNPKAFSDLEPIPEDIQVK
>Mature_344_residues
MKHLIAAILAATLSTGTAWAEDPLPIRIGAASAVDHAPVFIGVEKGIFAAHGLDADVVMYQSGVDMVNGLMNGAQEVNVM
GSVPFLSGISRGFPLVLIGHLHGDPNRTDYSDNQSVIASAESGVKKADIAALAGKRIGLPRGTGAEGYLFGLLKSAGLSE
KDVQLVNVQPAELVTALTQGDVDAISIWQPWAATALTKIEGTVEVVAGGCAGCYDPGTILTTRMVATEKPEELKRFMAAF
AEAQQWVRQNPDKAAEINTRWISGVDAETMALALKNIPLDSRISAHTAAMYQEKTLPFLVGLGRVEKVFDPSDSIDTSFL
KAAQESNPKAFSDLEPIPEDIQVK

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=238, Percent_Identity=26.0504201680672, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 36436; Mature: 36436

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLIAAILAATLSTGTAWAEDPLPIRIGAASAVDHAPVFIGVEKGIFAAHGLDADVVMY
CHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCEEEECCCCCEEEEE
QSGVDMVNGLMNGAQEVNVMGSVPFLSGISRGFPLVLIGHLHGDPNRTDYSDNQSVIASA
CCCHHHHHHHHCCHHHEEEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEHH
ESGVKKADIAALAGKRIGLPRGTGAEGYLFGLLKSAGLSEKDVQLVNVQPAELVTALTQG
HCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC
DVDAISIWQPWAATALTKIEGTVEVVAGGCAGCYDPGTILTTRMVATEKPEELKRFMAAF
CCCEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHH
AEAQQWVRQNPDKAAEINTRWISGVDAETMALALKNIPLDSRISAHTAAMYQEKTLPFLV
HHHHHHHHCCCCCHHHCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
GLGRVEKVFDPSDSIDTSFLKAAQESNPKAFSDLEPIPEDIQVK
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHLIAAILAATLSTGTAWAEDPLPIRIGAASAVDHAPVFIGVEKGIFAAHGLDADVVMY
CHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCEEEECCCCCEEEEE
QSGVDMVNGLMNGAQEVNVMGSVPFLSGISRGFPLVLIGHLHGDPNRTDYSDNQSVIASA
CCCHHHHHHHHCCHHHEEEEECCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEHH
ESGVKKADIAALAGKRIGLPRGTGAEGYLFGLLKSAGLSEKDVQLVNVQPAELVTALTQG
HCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC
DVDAISIWQPWAATALTKIEGTVEVVAGGCAGCYDPGTILTTRMVATEKPEELKRFMAAF
CCCEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHHH
AEAQQWVRQNPDKAAEINTRWISGVDAETMALALKNIPLDSRISAHTAAMYQEKTLPFLV
HHHHHHHHCCCCCHHHCCHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
GLGRVEKVFDPSDSIDTSFLKAAQESNPKAFSDLEPIPEDIQVK
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]