| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hisC2 [H]
Identifier: 150398317
GI number: 150398317
Start: 3271524
End: 3272579
Strand: Direct
Name: hisC2 [H]
Synonym: Smed_3123
Alternate gene names: 150398317
Gene position: 3271524-3272579 (Clockwise)
Preceding gene: 150398316
Following gene: 150398322
Centisome position: 86.5
GC content: 62.12
Gene sequence:
>1056_bases ATGAGCAGATTCTGGTCGCCGATCGTTGCCGCCTTGAAGCCTTACGTTCCCGGTGAACAGCCGCGGATGGCGAACCTCGT CAAGCTCAACACCAATGAGAGCCCCTATGGCCCCTCGGAAAAAGCGCTGGAGGCGATTCGGGCGGCGGCTGACATGGATC TCAGGCTTTATCCGGATCCCGTCGCTCTCGGGTTGCGGGAGGCGATCGCCAGGCGCTACGGCATGTCCGTCGGCGAGGTC TTCGTCGGCAATGGTTCCGACGAGGTTCTGGCCCACACCTTCGCGGCGCTTTTGAAACACGATCGGCCGCTGCTTTATCC TGACATCTCCTACAGCTTCTATCCGACCTATGCGGGCCTTTTCGGCATCGAAGCGGTCGAGATTCCGCTGAACGCCGACT TCCGCATCGAAATTGCAGGCTATCGCCGCCCTGCCGGCGCCATCATCCTGCCGAATCCGAATGCGCCGACGGGAATCGGC CTGCCGCTTTCCGACATTGAAAGGCTGGTGAGCGAGCATTCCGACCAGCCCGTGGTCGTCGACGAGGCCTATATCGACTT CGGCGGCGAATCCGCGATCGCACTCGTTCCGAAATACGAGAACCTGCTCGTCGTTCAGACCTTCTCGAAGTCACGTGCGC TTGCCGGTCTTCGCGTCGGCTTCGCGATAGGCCAAAGGCCGCTGATCGAGGCGTTGGAGCGCGTCAAGGATAGTTTCAAT TCCTATCCGCTCGGGCGCGCCGCCCTTGCGGGTGCAACGGCTGCGATCGAGGACGAGGCCTGGTTCGAGAAGACGCGCGC CAAGATCCTCGCCACGCGGGCGGCATTGACGAAGGGGCTCGAAGCGCGCGGTTTCGAGGTCCTGCCGTCTCAGGCGAATT TCGTCTTCGCCCGGCATCAGAACCACGCGGGCCAGACGCTGGCGGCGAAACTCCGCGAACGCGCGGTCATCGTCCGCCGT TTTGCCAAGCCCCGGATTGAGGATTTCCTGCGCATCACCATCGGCACCGATGATGAATGCGCCAAACTGGTCGCGGCGCT CGACGAAATTCTGTGA
Upstream 100 bases:
>100_bases CCTGGTGGCCGAGGCGGAAGCGCTCCTTGAGCCTTATGGCGCCCGTTCGGAGGTCCTTGCCGAGACCGCTCGTTTCATTG CCAACCGCAGGAACTGATAG
Downstream 100 bases:
>100_bases GATCGCAGGTCAGATTGAAGCGGCACCGGCGAGATTGCGGCGCCGCCTCCTGACCGGCGATATCACCAGCAGCAGAAGCC GCCATCAACGAGAAGGTCTA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSRFWSPIVAALKPYVPGEQPRMANLVKLNTNESPYGPSEKALEAIRAAADMDLRLYPDPVALGLREAIARRYGMSVGEV FVGNGSDEVLAHTFAALLKHDRPLLYPDISYSFYPTYAGLFGIEAVEIPLNADFRIEIAGYRRPAGAIILPNPNAPTGIG LPLSDIERLVSEHSDQPVVVDEAYIDFGGESAIALVPKYENLLVVQTFSKSRALAGLRVGFAIGQRPLIEALERVKDSFN SYPLGRAALAGATAAIEDEAWFEKTRAKILATRAALTKGLEARGFEVLPSQANFVFARHQNHAGQTLAAKLRERAVIVRR FAKPRIEDFLRITIGTDDECAKLVAALDEIL
Sequences:
>Translated_351_residues MSRFWSPIVAALKPYVPGEQPRMANLVKLNTNESPYGPSEKALEAIRAAADMDLRLYPDPVALGLREAIARRYGMSVGEV FVGNGSDEVLAHTFAALLKHDRPLLYPDISYSFYPTYAGLFGIEAVEIPLNADFRIEIAGYRRPAGAIILPNPNAPTGIG LPLSDIERLVSEHSDQPVVVDEAYIDFGGESAIALVPKYENLLVVQTFSKSRALAGLRVGFAIGQRPLIEALERVKDSFN SYPLGRAALAGATAAIEDEAWFEKTRAKILATRAALTKGLEARGFEVLPSQANFVFARHQNHAGQTLAAKLRERAVIVRR FAKPRIEDFLRITIGTDDECAKLVAALDEIL >Mature_350_residues SRFWSPIVAALKPYVPGEQPRMANLVKLNTNESPYGPSEKALEAIRAAADMDLRLYPDPVALGLREAIARRYGMSVGEVF VGNGSDEVLAHTFAALLKHDRPLLYPDISYSFYPTYAGLFGIEAVEIPLNADFRIEIAGYRRPAGAIILPNPNAPTGIGL PLSDIERLVSEHSDQPVVVDEAYIDFGGESAIALVPKYENLLVVQTFSKSRALAGLRVGFAIGQRPLIEALERVKDSFNS YPLGRAALAGATAAIEDEAWFEKTRAKILATRAALTKGLEARGFEVLPSQANFVFARHQNHAGQTLAAKLRERAVIVRRF AKPRIEDFLRITIGTDDECAKLVAALDEIL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=350, Percent_Identity=27.1428571428571, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788722, Length=257, Percent_Identity=32.6848249027237, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322075, Length=387, Percent_Identity=28.4237726098191, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38400; Mature: 38268
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFWSPIVAALKPYVPGEQPRMANLVKLNTNESPYGPSEKALEAIRAAADMDLRLYPDP CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEECCCH VALGLREAIARRYGMSVGEVFVGNGSDEVLAHTFAALLKHDRPLLYPDISYSFYPTYAGL HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FGIEAVEIPLNADFRIEIAGYRRPAGAIILPNPNAPTGIGLPLSDIERLVSEHSDQPVVV HCCEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEE DEAYIDFGGESAIALVPKYENLLVVQTFSKSRALAGLRVGFAIGQRPLIEALERVKDSFN EEHEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC SYPLGRAALAGATAAIEDEAWFEKTRAKILATRAALTKGLEARGFEVLPSQANFVFARHQ CCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECC NHAGQTLAAKLRERAVIVRRFAKPRIEDFLRITIGTDDECAKLVAALDEIL CCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHHC >Mature Secondary Structure SRFWSPIVAALKPYVPGEQPRMANLVKLNTNESPYGPSEKALEAIRAAADMDLRLYPDP CCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEECCCH VALGLREAIARRYGMSVGEVFVGNGSDEVLAHTFAALLKHDRPLLYPDISYSFYPTYAGL HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FGIEAVEIPLNADFRIEIAGYRRPAGAIILPNPNAPTGIGLPLSDIERLVSEHSDQPVVV HCCEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEE DEAYIDFGGESAIALVPKYENLLVVQTFSKSRALAGLRVGFAIGQRPLIEALERVKDSFN EEHEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC SYPLGRAALAGATAAIEDEAWFEKTRAKILATRAALTKGLEARGFEVLPSQANFVFARHQ CCCCCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECC NHAGQTLAAKLRERAVIVRRFAKPRIEDFLRITIGTDDECAKLVAALDEIL CCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]