| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is phhB [H]
Identifier: 150398265
GI number: 150398265
Start: 3219550
End: 3219867
Strand: Reverse
Name: phhB [H]
Synonym: Smed_3071
Alternate gene names: 150398265
Gene position: 3219867-3219550 (Counterclockwise)
Preceding gene: 150398266
Following gene: 150398264
Centisome position: 85.14
GC content: 59.12
Gene sequence:
>318_bases ATGCGGCCGGAAAAATTGGACGCGGCGGCCATTGCCGAGCAATTGCACAGGATGGAGGGCTGGGTTCTTGCCGAGGACGG CGGTTCGATATGGAAGGCGTTCCGGTTCAAGAGTTTTGCCGAGGCATTCGCCTTCATGACGCAATGCGCCTTCGCCGCCG AGAAGCTCAACCACCACCCCGAATGGTTCAACGTCTACAACAAGGTGGACGTCACGCTGTCGACTCACGACGCGCAAGGT TTGACCGAACTCGATTTCAAGCTGGCGGCAAAGATGGACCAGGCGGCGGAGGGCCGGATGCCCGACCACATGAAATAG
Upstream 100 bases:
>100_bases TGATATCCACTCAGCCTTGCAGGCATGGCGGCGGGGTTGCGCGTGAACATTGTCGCGGGCGATTTCGTTGTTAAGCACGG ATGAAGCAAGGAGGAACAGC
Downstream 100 bases:
>100_bases GGCCGGAGGCCCGCGACTTTGAAATGGCGGCCGCCATTCCCATATCAGGATTGCGGCGCTCTTCGAAGCCGCCGCAGCTT TTTGGCCAACCGGAACGGAA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MRPEKLDAAAIAEQLHRMEGWVLAEDGGSIWKAFRFKSFAEAFAFMTQCAFAAEKLNHHPEWFNVYNKVDVTLSTHDAQG LTELDFKLAAKMDQAAEGRMPDHMK
Sequences:
>Translated_105_residues MRPEKLDAAAIAEQLHRMEGWVLAEDGGSIWKAFRFKSFAEAFAFMTQCAFAAEKLNHHPEWFNVYNKVDVTLSTHDAQG LTELDFKLAAKMDQAAEGRMPDHMK >Mature_105_residues MRPEKLDAAAIAEQLHRMEGWVLAEDGGSIWKAFRFKSFAEAFAFMTQCAFAAEKLNHHPEWFNVYNKVDVTLSTHDAQG LTELDFKLAAKMDQAAEGRMPDHMK
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=80, Percent_Identity=56.25, Blast_Score=95, Evalue=1e-20, Organism=Homo sapiens, GI134133240, Length=110, Percent_Identity=41.8181818181818, Blast_Score=92, Evalue=8e-20, Organism=Caenorhabditis elegans, GI115533705, Length=94, Percent_Identity=51.063829787234, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI45549100, Length=95, Percent_Identity=49.4736842105263, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11945; Mature: 11945
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPEKLDAAAIAEQLHRMEGWVLAEDGGSIWKAFRFKSFAEAFAFMTQCAFAAEKLNHHP CCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWFNVYNKVDVTLSTHDAQGLTELDFKLAAKMDQAAEGRMPDHMK CHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRPEKLDAAAIAEQLHRMEGWVLAEDGGSIWKAFRFKSFAEAFAFMTQCAFAAEKLNHHP CCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWFNVYNKVDVTLSTHDAQGLTELDFKLAAKMDQAAEGRMPDHMK CHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]