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The map label for this gene is 150398260

Identifier: 150398260

GI number: 150398260

Start: 3214468

End: 3215346

Strand: Reverse

Name: 150398260

Synonym: Smed_3066

Alternate gene names: NA

Gene position: 3215346-3214468 (Counterclockwise)

Preceding gene: 150398261

Following gene: 150398259

Centisome position: 85.02

GC content: 62.91

Gene sequence:

>879_bases
TTGAGTCAAATCGCTTTCTGGGGAGCCGTGGAACTGGGGCTTGTCTATGCCTTCGTCGCCGTCGGCGTCTTTCTCGCCTT
CCGGGTGCTCGACTTTCCCGACCTGACCGTTGACGGGTCGTTTCCGCTCGGCGCGGCAGTTACCGCGGTCCTGATCATAG
CCGGCGTCAATCCGTGGCTTGCAGCAGCGGTGGCAATGGTCGCGGGTGCCGCCGCGGGTATCGTCACGGCGCTCCTGAAT
GTGCGGTTCAAAATCCTCAACCTGCTCGCCTCGATCCTGACGATGATTGCGCTGTTCTCGGTCAATCTCCGTGTCATGGG
CAAGCCGAATGTCGCGCTGATCAATGCCGATACGATGCTGTCGCCCTTTTACGGGCTTGGCATCCGGGACTTTTATGTGC
GGCCGCTATTCGTCGGTATCCTCGTCGCCGTCGCCGTCGTTATCGTATGGCGCTTCTTGGAAAGCGATGCGGGGCTGGCG
ATGCGGGCAACCGGCGCCAATTCGCGCATGGCGCGGGCGCAAGGAGTCGATACCAGCCGGCAGATTTATCTCGGAATGGC
GATCTCCAACGCACTCGTTGCGCTGGGCGGTGCGCTCTTTGCCCAGACTAACGGCTTTGCCGACGTGACCTCGGGCGTCG
GCACGATCGTCGTCGGGCTTGCCGCAGTGATCATCGGCGAGACGCTGCTCGGTGCCCGCGGCATTCTGATCGCGCTCATC
GGCTGCGTTCTCGGGTCGATCCTCTACCGCATCGCGATCCAGGTGGCGCTTTCGACGGATACGCTCGGGCTGCAGGCGTC
CGACCTCAATTTCGTGACCGCGCTGCTCGTGACGATAGCGCTCATCCTGCCCCGTCTGCGCCGCGGAGGTGCCGCATGA

Upstream 100 bases:

>100_bases
GAGCGGAATGAGCAATCGTGCCCATCGCTCCCATTTTGAGAATACATGTTCCGCATGCGCCTCAAGCCTGCGGAGCAACC
GAGGAAAAGGACTGCCGGCG

Downstream 100 bases:

>100_bases
TCAACGTCGAAAACATCCAGGTCGTCTTCGGCAAGGGCACTCCGCTCCAGAAGCAGGCGCTGAACGGCGTCAGCCTGATC
ATCGAGGAAGGCTCCTTCGT

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSQIAFWGAVELGLVYAFVAVGVFLAFRVLDFPDLTVDGSFPLGAAVTAVLIIAGVNPWLAAAVAMVAGAAAGIVTALLN
VRFKILNLLASILTMIALFSVNLRVMGKPNVALINADTMLSPFYGLGIRDFYVRPLFVGILVAVAVVIVWRFLESDAGLA
MRATGANSRMARAQGVDTSRQIYLGMAISNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALI
GCVLGSILYRIAIQVALSTDTLGLQASDLNFVTALLVTIALILPRLRRGGAA

Sequences:

>Translated_292_residues
MSQIAFWGAVELGLVYAFVAVGVFLAFRVLDFPDLTVDGSFPLGAAVTAVLIIAGVNPWLAAAVAMVAGAAAGIVTALLN
VRFKILNLLASILTMIALFSVNLRVMGKPNVALINADTMLSPFYGLGIRDFYVRPLFVGILVAVAVVIVWRFLESDAGLA
MRATGANSRMARAQGVDTSRQIYLGMAISNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALI
GCVLGSILYRIAIQVALSTDTLGLQASDLNFVTALLVTIALILPRLRRGGAA
>Mature_291_residues
SQIAFWGAVELGLVYAFVAVGVFLAFRVLDFPDLTVDGSFPLGAAVTAVLIIAGVNPWLAAAVAMVAGAAAGIVTALLNV
RFKILNLLASILTMIALFSVNLRVMGKPNVALINADTMLSPFYGLGIRDFYVRPLFVGILVAVAVVIVWRFLESDAGLAM
RATGANSRMARAQGVDTSRQIYLGMAISNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALIG
CVLGSILYRIAIQVALSTDTLGLQASDLNFVTALLVTIALILPRLRRGGAA

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30233; Mature: 30101

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIAFWGAVELGLVYAFVAVGVFLAFRVLDFPDLTVDGSFPLGAAVTAVLIIAGVNPWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCHHH
AAAVAMVAGAAAGIVTALLNVRFKILNLLASILTMIALFSVNLRVMGKPNVALINADTML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHH
SPFYGLGIRDFYVRPLFVGILVAVAVVIVWRFLESDAGLAMRATGANSRMARAQGVDTSR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCH
QIYLGMAISNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALI
HEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCVLGSILYRIAIQVALSTDTLGLQASDLNFVTALLVTIALILPRLRRGGAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQIAFWGAVELGLVYAFVAVGVFLAFRVLDFPDLTVDGSFPLGAAVTAVLIIAGVNPWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCHHH
AAAVAMVAGAAAGIVTALLNVRFKILNLLASILTMIALFSVNLRVMGKPNVALINADTML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCHHH
SPFYGLGIRDFYVRPLFVGILVAVAVVIVWRFLESDAGLAMRATGANSRMARAQGVDTSR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCH
QIYLGMAISNALVALGGALFAQTNGFADVTSGVGTIVVGLAAVIIGETLLGARGILIALI
HEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCVLGSILYRIAIQVALSTDTLGLQASDLNFVTALLVTIALILPRLRRGGAA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]