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The map label for this gene is 150398261

Identifier: 150398261

GI number: 150398261

Start: 3215539

End: 3216492

Strand: Reverse

Name: 150398261

Synonym: Smed_3067

Alternate gene names: NA

Gene position: 3216492-3215539 (Counterclockwise)

Preceding gene: 150398262

Following gene: 150398260

Centisome position: 85.05

GC content: 64.57

Gene sequence:

>954_bases
ATGCGTTCGCTTCTCATCGCGCTTGCCGCCACGGTCGCGCTTTCACTGCCGGCACGCGCCGACGAGGTCACGGTCGCCGT
GACGGCAATCGTCGAACATCCGGCGCTCGATGCCGCCCGCGACGGCGTCAAGGATGCGCTGGCCGCCGCTGGCTACAAGG
AAGGCGAGAACCTCAAGTTCATCTACGAGTCGGCGCAGGGCAATCCGGCGACTGCTGCGCAGATCGCCCGCCAGTTCGCC
GGTGAAGCCCCGAACGTGATCGTGCCGATTTCCACCCCGTCGGCCCAGGCCGTCGTTTCCTCCACCCGCGATATCCCCGT
TGTTTTCACCGCCGTTTCCGATCCGCTGGGCGCGCAGCTCGTGAAGGATATGGAGAAGCCCGGCGGCAACGTCACCGGTC
TTTCCGACCTGTCCCCGGTTGCCGAGCACGTGGCGCTGATCAAGGAGATCCTGCCGAACGTCAAGACGATCGGCTTTCTC
TACAATTCGGGCGAGGCGAATTCCGTATCGCTGCTGGCGGTTCTCAAGGAAGAGGCTGAAAAGGCCGGCCTGAGCGTGAT
CGAATCCGCCGCGACGAAATCGGCCGAGGTTCAGGGGGCGGCTCGTGCGCTCGTCGGCCGCGCCGACGTGATCTACATTC
CGACGGACAACACCATCATCTCCGCGCTCGAAGGCGCCGTTGCGGTCGCCGAGGAAAGTAAGCTGCCGCTTTTCACCGCC
GACACCGATTCCGTTTCCCGTGGCGCCGTCGCGGCGCTCGGTTTCAATTACTATGATGTCGGCAAACAGACCGGCGAGGT
GGTTGTCCGTGTCCTCAAGGGCGAAAACCCCGGCGACATTGCCGTCAAGGTTGCGGCCGGAACCGACCTCGTGATCAACA
AGGGCGCCGCCACCCGCATGGGGATCACCCTGCCGGAGAGCGTCGTCGGCCGGGCGACCCGCACGATCGAATAA

Upstream 100 bases:

>100_bases
GCTTTCCTAAGAATGTGGCGAAAATATTCTACAGCGGGATGCGGGAGGGGCGTTGCATTGCCTATTCCGGAAATCGCCAA
CCAAAAACCGGAGGACACCC

Downstream 100 bases:

>100_bases
AAATGCCTTCGAGCGTCTGACAGGACGCGGCGCTGCACGGATATTGTTGCGTTTTCGCCGCCCTCGTTCCATACGGGGGC
GGTTTGCTTATAGAGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRSLLIALAATVALSLPARADEVTVAVTAIVEHPALDAARDGVKDALAAAGYKEGENLKFIYESAQGNPATAAQIARQFA
GEAPNVIVPISTPSAQAVVSSTRDIPVVFTAVSDPLGAQLVKDMEKPGGNVTGLSDLSPVAEHVALIKEILPNVKTIGFL
YNSGEANSVSLLAVLKEEAEKAGLSVIESAATKSAEVQGAARALVGRADVIYIPTDNTIISALEGAVAVAEESKLPLFTA
DTDSVSRGAVAALGFNYYDVGKQTGEVVVRVLKGENPGDIAVKVAAGTDLVINKGAATRMGITLPESVVGRATRTIE

Sequences:

>Translated_317_residues
MRSLLIALAATVALSLPARADEVTVAVTAIVEHPALDAARDGVKDALAAAGYKEGENLKFIYESAQGNPATAAQIARQFA
GEAPNVIVPISTPSAQAVVSSTRDIPVVFTAVSDPLGAQLVKDMEKPGGNVTGLSDLSPVAEHVALIKEILPNVKTIGFL
YNSGEANSVSLLAVLKEEAEKAGLSVIESAATKSAEVQGAARALVGRADVIYIPTDNTIISALEGAVAVAEESKLPLFTA
DTDSVSRGAVAALGFNYYDVGKQTGEVVVRVLKGENPGDIAVKVAAGTDLVINKGAATRMGITLPESVVGRATRTIE
>Mature_317_residues
MRSLLIALAATVALSLPARADEVTVAVTAIVEHPALDAARDGVKDALAAAGYKEGENLKFIYESAQGNPATAAQIARQFA
GEAPNVIVPISTPSAQAVVSSTRDIPVVFTAVSDPLGAQLVKDMEKPGGNVTGLSDLSPVAEHVALIKEILPNVKTIGFL
YNSGEANSVSLLAVLKEEAEKAGLSVIESAATKSAEVQGAARALVGRADVIYIPTDNTIISALEGAVAVAEESKLPLFTA
DTDSVSRGAVAALGFNYYDVGKQTGEVVVRVLKGENPGDIAVKVAAGTDLVINKGAATRMGITLPESVVGRATRTIE

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32537; Mature: 32537

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLIALAATVALSLPARADEVTVAVTAIVEHPALDAARDGVKDALAAAGYKEGENLKF
CHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEE
IYESAQGNPATAAQIARQFAGEAPNVIVPISTPSAQAVVSSTRDIPVVFTAVSDPLGAQL
EEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCEEEEECCCCHHHHH
VKDMEKPGGNVTGLSDLSPVAEHVALIKEILPNVKTIGFLYNSGEANSVSLLAVLKEEAE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHH
KAGLSVIESAATKSAEVQGAARALVGRADVIYIPTDNTIISALEGAVAVAEESKLPLFTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHEEECCCCCCEEEC
DTDSVSRGAVAALGFNYYDVGKQTGEVVVRVLKGENPGDIAVKVAAGTDLVINKGAATRM
CCCCCCCCEEEEECCCHHHCCCHHHHHHHHEECCCCCCCEEEEEECCCEEEEECCCCCEE
GITLPESVVGRATRTIE
CCCCCHHHHCCHHHCCC
>Mature Secondary Structure
MRSLLIALAATVALSLPARADEVTVAVTAIVEHPALDAARDGVKDALAAAGYKEGENLKF
CHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEE
IYESAQGNPATAAQIARQFAGEAPNVIVPISTPSAQAVVSSTRDIPVVFTAVSDPLGAQL
EEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCEEEEECCCCHHHHH
VKDMEKPGGNVTGLSDLSPVAEHVALIKEILPNVKTIGFLYNSGEANSVSLLAVLKEEAE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHH
KAGLSVIESAATKSAEVQGAARALVGRADVIYIPTDNTIISALEGAVAVAEESKLPLFTA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHEEECCCCCCEEEC
DTDSVSRGAVAALGFNYYDVGKQTGEVVVRVLKGENPGDIAVKVAAGTDLVINKGAATRM
CCCCCCCCEEEEECCCHHHCCCHHHHHHHHEECCCCCCCEEEEEECCCEEEEECCCCCEE
GITLPESVVGRATRTIE
CCCCCHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA