| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398252
Identifier: 150398252
GI number: 150398252
Start: 3207399
End: 3207956
Strand: Reverse
Name: 150398252
Synonym: Smed_3058
Alternate gene names: NA
Gene position: 3207956-3207399 (Counterclockwise)
Preceding gene: 150398253
Following gene: 150398250
Centisome position: 84.82
GC content: 65.95
Gene sequence:
>558_bases ATGCCTGATGACGCCCGACCCGCGGCACGCCGCCTCTTGCTGCTCCGCCACGCGAAATCCGCCTGGCCGGACGATGTCCA CGACCATTGCCGGCCGCTTTCGCAGCGCGGGCGGAAAGCGGCTCCCGCCCTCGGTGCCTTCATGGCGCGCCAAGGGTTTG CTCCGGACCTGGCCCTCGTTTCGACCGCGCGGCGTGCGCAGGAGACATGGGAGTTCGTCGCCGGGGCTTTTCCGCAACGG ATCACTGCCCGCGATACCGCTGACATCTATGAGGTTGATGCGCCCGCGATTTTCGGCGTTATCCGCAAGGTGGAGCCGTC TGTCGAGACATTACTCCTCGTCGGCCACAATCCGGGAATGGCCGATCTCGCGCTACTGCTCGCCGGCCGCGGCGACGAAG CGGGGCTGGAGCAGTTGAGGGAGAAGTTTCCGACAGCCGGGCTGGCCGTCATCGATTTCGAAGCCGGGAGCTGGTCGGAA ATTGCGCGCGGCACCGGCCGCCTTGTCCGCTTCGTGACGCCGCGCCTGTTGAAACAAGAGCAATCCGGTTTAGCGTAG
Upstream 100 bases:
>100_bases GCTTCCGCCATCTGGCCGCCCTTCGGGGCGGCTTTTTTTACACTCCAGGCAGTGCGACAATGCGCGGCCATCCCCGCGAA AACTGCCCGTGAGGAGTTCA
Downstream 100 bases:
>100_bases TTCAGCCCGCCCGGCATCATGACGACCGTCTGCCGGAAGGCTGATGAGGAGCCAAAGCGAGCGCGACTCAAGGGCGGAGC CTACACGACCTTCACGATCG
Product: putative phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPDDARPAARRLLLLRHAKSAWPDDVHDHCRPLSQRGRKAAPALGAFMARQGFAPDLALVSTARRAQETWEFVAGAFPQR ITARDTADIYEVDAPAIFGVIRKVEPSVETLLLVGHNPGMADLALLLAGRGDEAGLEQLREKFPTAGLAVIDFEAGSWSE IARGTGRLVRFVTPRLLKQEQSGLA
Sequences:
>Translated_185_residues MPDDARPAARRLLLLRHAKSAWPDDVHDHCRPLSQRGRKAAPALGAFMARQGFAPDLALVSTARRAQETWEFVAGAFPQR ITARDTADIYEVDAPAIFGVIRKVEPSVETLLLVGHNPGMADLALLLAGRGDEAGLEQLREKFPTAGLAVIDFEAGSWSE IARGTGRLVRFVTPRLLKQEQSGLA >Mature_184_residues PDDARPAARRLLLLRHAKSAWPDDVHDHCRPLSQRGRKAAPALGAFMARQGFAPDLALVSTARRAQETWEFVAGAFPQRI TARDTADIYEVDAPAIFGVIRKVEPSVETLLLVGHNPGMADLALLLAGRGDEAGLEQLREKFPTAGLAVIDFEAGSWSEI ARGTGRLVRFVTPRLLKQEQSGLA
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 20143; Mature: 20012
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDARPAARRLLLLRHAKSAWPDDVHDHCRPLSQRGRKAAPALGAFMARQGFAPDLALV CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH STARRAQETWEFVAGAFPQRITARDTADIYEVDAPAIFGVIRKVEPSVETLLLVGHNPGM HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCHHEEEEECCCCCH ADLALLLAGRGDEAGLEQLREKFPTAGLAVIDFEAGSWSEIARGTGRLVRFVTPRLLKQE HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QSGLA HCCCC >Mature Secondary Structure PDDARPAARRLLLLRHAKSAWPDDVHDHCRPLSQRGRKAAPALGAFMARQGFAPDLALV CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH STARRAQETWEFVAGAFPQRITARDTADIYEVDAPAIFGVIRKVEPSVETLLLVGHNPGM HHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCHHEEEEECCCCCH ADLALLLAGRGDEAGLEQLREKFPTAGLAVIDFEAGSWSEIARGTGRLVRFVTPRLLKQE HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QSGLA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]