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The map label for this gene is yibP [C]

Identifier: 150398210

GI number: 150398210

Start: 3162955

End: 3164391

Strand: Direct

Name: yibP [C]

Synonym: Smed_3015

Alternate gene names: 150398210

Gene position: 3162955-3164391 (Clockwise)

Preceding gene: 150398209

Following gene: 150398211

Centisome position: 83.63

GC content: 63.81

Gene sequence:

>1437_bases
ATGAGACCTCCAACGAATAGAGCCGATCTGATATCCTATGCGCGCCGGATCGGCCGCGGCATTGCGGTCGCGTCGCTTTT
GCTGTCGATGATCGGCCCGGCTGCGGCTCAAAACGCGCCAGCCGATGTGTTTGCCGATGCGCCCGCGGGCAGGAATGCCG
CCGGGCAGACGCCGCCGGACCCGGCAGCCGATCTTGCGGTTCGTCGCGACAGTACCGCTAGCGAACTCGAGGCGTTGTCC
AGGACGATCACGCTTTCGCGGGAGCGCTCCCAATCGCTCGAAAAGACGATCGCCGAGATCGACAAGAACAACGAGGCCCT
TCGTGACGCCCTCGTCTCTTCGGCAGCCAAGCGGCAGGAACTGGAACGCAAGATCGTCGACGGGGAGAAGAAGCTTGGTG
ATTTGCGCGTCAAGGAGGATGTGGTGCGGCGTTCGTTGCGCGCCCGTCGCGGTCTTCTTGCCGAAGTACTCGCCGCCCTT
CAACGCATGGGCCGCAATCCGCCCCCGGCAATCCTCGTGACGCCGGAGGATGCACTCGGCTCGGTGCGCAGCGCCATCCT
GCTCGGCGCCGTCGTACCTGAAATCCGCGAACAGACCGAAAGCCTCGTCGCCGACCTGAAGGCGCTCGCGGACATCCGCG
TCGGCATCGCCAGGGAACGCGAGGAACTGACCGCGGCAATGACCGCCAGGCTCGAGGAAGAGCGGCGTATGTCGATGCTC
GTCGCCGAGAAGGAGAAGCTGAGGCAACGGAATGCGGCAGACCTGGCGGCCGAACAGCGCAAGGCCGAGGAACTCGCTTT
GCAGGCAACCAACCTCGAAGGACTGATCGCATCGATCGAAAACGAGATCTCCTCCGTACGCGAGGCGGCTGCCGCCGCCC
GTGCCGAGGAGGAGGAACGCCGCCGCATGAGCGAGGCTGAACGCGAGGCTGCGCGGGAGCTCGCGAGGAGTGCGGTGCCC
GACAAAAACCGCATTGCCCCGGCATATGTCTTTTCCGAGTTGCGGGAGCGGCTGGTTTATCCCGTCGCGGGTTCGCTTGT
GCGCCGTTTTGGCGACGCGGACGGAACAGGGCATTCGCTGCAGGGGATCATGCTTGAGACCAATGCAGACGCGCTGGTGA
CCACGCCGGCGGACGGGTGGATTGTCTATGCCGGGAGTTTCCGCAGCTACGGGCAGATGATCATTCTCAACGCCGGTGAC
GGGTATCACATCGTGCTCGCCGGCATGGAGAACGTCACTGTCCGGCCTGGGCAGTTCGTGGTGGCCGGAGAGCCGGTGGG
GACGATGGGTGCAAAAAGAGTGGCGAGTGCGGCAGCCTTGGCGCTGGAAACCGACAGGCCAACGCTTTACATTGAGTTCA
GAAAAGACGGGAAACCGGTTGATTCCCGACCGTGGTGGACCGCAGCAGAGGTTGGAAGGGCGCGAAATGATACGTAG

Upstream 100 bases:

>100_bases
TACGAACACCGACATCACCTCACCCCCAATAACGCGATTATGTATTGGTGTGCCCGGCAAATCAGAATAGGGTCCCCTGA
CTTTGGACTTACGTGACTGG

Downstream 100 bases:

>100_bases
AGCTTCACTTGTCCTGGTCGGGGCGCTGATGGGCGCGACGGCGATGGGCGTCGTCTATTCGGCAACGATGCCGGCCGTGG
CCGCGAATTCGTCGACATAC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MRPPTNRADLISYARRIGRGIAVASLLLSMIGPAAAQNAPADVFADAPAGRNAAGQTPPDPAADLAVRRDSTASELEALS
RTITLSRERSQSLEKTIAEIDKNNEALRDALVSSAAKRQELERKIVDGEKKLGDLRVKEDVVRRSLRARRGLLAEVLAAL
QRMGRNPPPAILVTPEDALGSVRSAILLGAVVPEIREQTESLVADLKALADIRVGIAREREELTAAMTARLEEERRMSML
VAEKEKLRQRNAADLAAEQRKAEELALQATNLEGLIASIENEISSVREAAAAARAEEEERRRMSEAEREAARELARSAVP
DKNRIAPAYVFSELRERLVYPVAGSLVRRFGDADGTGHSLQGIMLETNADALVTTPADGWIVYAGSFRSYGQMIILNAGD
GYHIVLAGMENVTVRPGQFVVAGEPVGTMGAKRVASAAALALETDRPTLYIEFRKDGKPVDSRPWWTAAEVGRARNDT

Sequences:

>Translated_478_residues
MRPPTNRADLISYARRIGRGIAVASLLLSMIGPAAAQNAPADVFADAPAGRNAAGQTPPDPAADLAVRRDSTASELEALS
RTITLSRERSQSLEKTIAEIDKNNEALRDALVSSAAKRQELERKIVDGEKKLGDLRVKEDVVRRSLRARRGLLAEVLAAL
QRMGRNPPPAILVTPEDALGSVRSAILLGAVVPEIREQTESLVADLKALADIRVGIAREREELTAAMTARLEEERRMSML
VAEKEKLRQRNAADLAAEQRKAEELALQATNLEGLIASIENEISSVREAAAAARAEEEERRRMSEAEREAARELARSAVP
DKNRIAPAYVFSELRERLVYPVAGSLVRRFGDADGTGHSLQGIMLETNADALVTTPADGWIVYAGSFRSYGQMIILNAGD
GYHIVLAGMENVTVRPGQFVVAGEPVGTMGAKRVASAAALALETDRPTLYIEFRKDGKPVDSRPWWTAAEVGRARNDT
>Mature_478_residues
MRPPTNRADLISYARRIGRGIAVASLLLSMIGPAAAQNAPADVFADAPAGRNAAGQTPPDPAADLAVRRDSTASELEALS
RTITLSRERSQSLEKTIAEIDKNNEALRDALVSSAAKRQELERKIVDGEKKLGDLRVKEDVVRRSLRARRGLLAEVLAAL
QRMGRNPPPAILVTPEDALGSVRSAILLGAVVPEIREQTESLVADLKALADIRVGIAREREELTAAMTARLEEERRMSML
VAEKEKLRQRNAADLAAEQRKAEELALQATNLEGLIASIENEISSVREAAAAARAEEEERRRMSEAEREAARELARSAVP
DKNRIAPAYVFSELRERLVYPVAGSLVRRFGDADGTGHSLQGIMLETNADALVTTPADGWIVYAGSFRSYGQMIILNAGD
GYHIVLAGMENVTVRPGQFVVAGEPVGTMGAKRVASAAALALETDRPTLYIEFRKDGKPVDSRPWWTAAEVGRARNDT

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 51846; Mature: 51846

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPTNRADLISYARRIGRGIAVASLLLSMIGPAAAQNAPADVFADAPAGRNAAGQTPPD
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCHHEECCCCCCCCCCCCCCC
PAADLAVRRDSTASELEALSRTITLSRERSQSLEKTIAEIDKNNEALRDALVSSAAKRQE
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LERKIVDGEKKLGDLRVKEDVVRRSLRARRGLLAEVLAALQRMGRNPPPAILVTPEDALG
HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCHHHHH
SVRSAILLGAVVPEIREQTESLVADLKALADIRVGIAREREELTAAMTARLEEERRMSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEKEKLRQRNAADLAAEQRKAEELALQATNLEGLIASIENEISSVREAAAAARAEEEER
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMSEAEREAARELARSAVPDKNRIAPAYVFSELRERLVYPVAGSLVRRFGDADGTGHSL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGIMLETNADALVTTPADGWIVYAGSFRSYGQMIILNAGDGYHIVLAGMENVTVRPGQFV
CEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCEE
VAGEPVGTMGAKRVASAAALALETDRPTLYIEFRKDGKPVDSRPWWTAAEVGRARNDT
EECCCCCHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRPPTNRADLISYARRIGRGIAVASLLLSMIGPAAAQNAPADVFADAPAGRNAAGQTPPD
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCCCCHHEECCCCCCCCCCCCCCC
PAADLAVRRDSTASELEALSRTITLSRERSQSLEKTIAEIDKNNEALRDALVSSAAKRQE
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LERKIVDGEKKLGDLRVKEDVVRRSLRARRGLLAEVLAALQRMGRNPPPAILVTPEDALG
HHHHHHCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCHHHHH
SVRSAILLGAVVPEIREQTESLVADLKALADIRVGIAREREELTAAMTARLEEERRMSML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEKEKLRQRNAADLAAEQRKAEELALQATNLEGLIASIENEISSVREAAAAARAEEEER
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRMSEAEREAARELARSAVPDKNRIAPAYVFSELRERLVYPVAGSLVRRFGDADGTGHSL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
QGIMLETNADALVTTPADGWIVYAGSFRSYGQMIILNAGDGYHIVLAGMENVTVRPGQFV
CEEEEECCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCEE
VAGEPVGTMGAKRVASAAALALETDRPTLYIEFRKDGKPVDSRPWWTAAEVGRARNDT
EECCCCCHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]