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The map label for this gene is ybeB [H]

Identifier: 150398208

GI number: 150398208

Start: 3161588

End: 3162088

Strand: Direct

Name: ybeB [H]

Synonym: Smed_3013

Alternate gene names: 150398208

Gene position: 3161588-3162088 (Clockwise)

Preceding gene: 150398207

Following gene: 150398209

Centisome position: 83.6

GC content: 56.69

Gene sequence:

>501_bases
ATGGGTTTGATGCCTACATTTAGGTACGGTTCGAAGAAATATTTCGAATCGAACGTGCCTGTTCTGTTCACTTGGAAAGG
AAAAACCCTGACAACAGCACACGCCAAGGGATATGCGGTCTCCGCGATCCCGCGCAGCACGGAATCGAGCGACGAAGCCG
CTGTCCGTGCGCTTCAACTGGTCCTCGAAAGCCTAGAGGACTCGAAGGCAGAAAATATCGTCACCATCGACATTGCCGGG
AAATCGGCGCTGGGAGACTTCATGGTCGTTGTCTCCGGGCGATCGAACAGGCATGTGATGGCCATTGCCGATCACCTGAT
CACGGACCTGAAGGACGACGGCCTCGGCAGGGCTCGCGTCGAGGGACTTGAGAGCGGTGACTGGGTACTGATCGACGCCG
GCGACGTGATCGTTCATATCTTCCGGCCGGAGATCCGGGAGTTCTACAACATCGAAAAGATGTGGGCGGCTCCCGACGTC
GAAGACGGTACCCTGCACTGA

Upstream 100 bases:

>100_bases
TTTCCGTTCCAGAAAGGCTCTAACCCATTGGAATCGGCCAGATTCATAATATCGGGGAGAGCCGACCTGAAATGATCGTT
ATCTCATGTCTTGAAACCGT

Downstream 100 bases:

>100_bases
GAAGCACCGCCCGATCCTGACCATCGTCTCAGGACGGAGCGACCGCCGGTGCCAATCGTGAAATAAGGCTGCCACCGCCG
ATGAGGCGGATGGCGGCAAG

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MGLMPTFRYGSKKYFESNVPVLFTWKGKTLTTAHAKGYAVSAIPRSTESSDEAAVRALQLVLESLEDSKAENIVTIDIAG
KSALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGRARVEGLESGDWVLIDAGDVIVHIFRPEIREFYNIEKMWAAPDV
EDGTLH

Sequences:

>Translated_166_residues
MGLMPTFRYGSKKYFESNVPVLFTWKGKTLTTAHAKGYAVSAIPRSTESSDEAAVRALQLVLESLEDSKAENIVTIDIAG
KSALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGRARVEGLESGDWVLIDAGDVIVHIFRPEIREFYNIEKMWAAPDV
EDGTLH
>Mature_165_residues
GLMPTFRYGSKKYFESNVPVLFTWKGKTLTTAHAKGYAVSAIPRSTESSDEAAVRALQLVLESLEDSKAENIVTIDIAGK
SALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGRARVEGLESGDWVLIDAGDVIVHIFRPEIREFYNIEKMWAAPDVE
DGTLH

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=124, Percent_Identity=28.2258064516129, Blast_Score=70, Evalue=7e-13,
Organism=Escherichia coli, GI87081768, Length=102, Percent_Identity=43.1372549019608, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 18279; Mature: 18148

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLMPTFRYGSKKYFESNVPVLFTWKGKTLTTAHAKGYAVSAIPRSTESSDEAAVRALQL
CCCCCCCCCCCCCEECCCCCEEEEECCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH
VLESLEDSKAENIVTIDIAGKSALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGRARV
HHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCHHH
EGLESGDWVLIDAGDVIVHIFRPEIREFYNIEKMWAAPDVEDGTLH
CCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GLMPTFRYGSKKYFESNVPVLFTWKGKTLTTAHAKGYAVSAIPRSTESSDEAAVRALQL
CCCCCCCCCCCCEECCCCCEEEEECCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHH
VLESLEDSKAENIVTIDIAGKSALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGRARV
HHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCHHH
EGLESGDWVLIDAGDVIVHIFRPEIREFYNIEKMWAAPDVEDGTLH
CCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]