| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is nadD [H]
Identifier: 150398207
GI number: 150398207
Start: 3160878
End: 3161486
Strand: Direct
Name: nadD [H]
Synonym: Smed_3012
Alternate gene names: 150398207
Gene position: 3160878-3161486 (Clockwise)
Preceding gene: 150398206
Following gene: 150398208
Centisome position: 83.58
GC content: 64.37
Gene sequence:
>609_bases GTGAATGCGCGCTATCTGAAGATGCCGCATGTCGAGTCCGGAATGACGGTCGGCCTGTTCGGCGGGTCCTTCAATCCGCC GCATGAGGGGCATGCGCTGGTAGCCGAGACCGCCTTGCGGAGACTGGGGCTCGATCAGCTCTGGTGGATGGTGACGCCGG GCAATCCGCTGAAGGACCGCAACAATCTGGCGCCGCTTGGCGAGCGTATCGCCAGGAGCGAGAAGATCGCTCGCAATCCA CGCATCAAGGTGACCGCTTTCGAGCAGGCGCTTGGCCAAAGCTATACGGCCCGTACGCTCGAGGTGATCCAGGCCCGCAA TCGCGATGTGCGTTTCGTCTGGGTCATGGGCGCGGACAATCTCAAGAATTTCCACCGCTGGCAGGACTGGCGCAGGATCG TCGCCACCTTCCCGATCGCCGTCATCGACCGGCCGGGGTCGACCCTTGCCTATCTCTCCTCGCCGATGGCGAGGGCTTTC AGCCAGGCTCGCGTCGACGAAGATCGCGCGGGCAGCCTGGCGTTGCGCCGCGCGCCCGCCTGGACTTTCATTCACGGACC CCGTTCGGGCCTGAGCTCGACGGCACTTCGTTCCGCTAATTCCGGGTGA
Upstream 100 bases:
>100_bases AGATGCATGCGCGCGGACCCGTCGGCGTGGAGCAGCTCACCTCGTTCAAGTATCGTGTGCGCGGCACGGGACAGGTGCGG CCCTGACGACACCGAGCCAA
Downstream 100 bases:
>100_bases ATTTCCGTTCCAGAAAGGCTCTAACCCATTGGAATCGGCCAGATTCATAATATCGGGGAGAGCCGACCTGAAATGATCGT TATCTCATGTCTTGAAACCG
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNARYLKMPHVESGMTVGLFGGSFNPPHEGHALVAETALRRLGLDQLWWMVTPGNPLKDRNNLAPLGERIARSEKIARNP RIKVTAFEQALGQSYTARTLEVIQARNRDVRFVWVMGADNLKNFHRWQDWRRIVATFPIAVIDRPGSTLAYLSSPMARAF SQARVDEDRAGSLALRRAPAWTFIHGPRSGLSSTALRSANSG
Sequences:
>Translated_202_residues MNARYLKMPHVESGMTVGLFGGSFNPPHEGHALVAETALRRLGLDQLWWMVTPGNPLKDRNNLAPLGERIARSEKIARNP RIKVTAFEQALGQSYTARTLEVIQARNRDVRFVWVMGADNLKNFHRWQDWRRIVATFPIAVIDRPGSTLAYLSSPMARAF SQARVDEDRAGSLALRRAPAWTFIHGPRSGLSSTALRSANSG >Mature_202_residues MNARYLKMPHVESGMTVGLFGGSFNPPHEGHALVAETALRRLGLDQLWWMVTPGNPLKDRNNLAPLGERIARSEKIARNP RIKVTAFEQALGQSYTARTLEVIQARNRDVRFVWVMGADNLKNFHRWQDWRRIVATFPIAVIDRPGSTLAYLSSPMARAF SQARVDEDRAGSLALRRAPAWTFIHGPRSGLSSTALRSANSG
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 22574; Mature: 22574
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARYLKMPHVESGMTVGLFGGSFNPPHEGHALVAETALRRLGLDQLWWMVTPGNPLKDR CCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC NNLAPLGERIARSEKIARNPRIKVTAFEQALGQSYTARTLEVIQARNRDVRFVWVMGADN CCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCC LKNFHRWQDWRRIVATFPIAVIDRPGSTLAYLSSPMARAFSQARVDEDRAGSLALRRAPA HHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC WTFIHGPRSGLSSTALRSANSG EEEEECCCCCHHHHHHHCCCCC >Mature Secondary Structure MNARYLKMPHVESGMTVGLFGGSFNPPHEGHALVAETALRRLGLDQLWWMVTPGNPLKDR CCCCEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC NNLAPLGERIARSEKIARNPRIKVTAFEQALGQSYTARTLEVIQARNRDVRFVWVMGADN CCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCC LKNFHRWQDWRRIVATFPIAVIDRPGSTLAYLSSPMARAFSQARVDEDRAGSLALRRAPA HHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC WTFIHGPRSGLSSTALRSANSG EEEEECCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]