Click here to switch to the map view.

The map label for this gene is 150398165

Identifier: 150398165

GI number: 150398165

Start: 3114373

End: 3115761

Strand: Direct

Name: 150398165

Synonym: Smed_2968

Alternate gene names: NA

Gene position: 3114373-3115761 (Clockwise)

Preceding gene: 150398164

Following gene: 150398166

Centisome position: 82.35

GC content: 66.45

Gene sequence:

>1389_bases
ATGTTGAAACGACGGGGTGTGCCTGCTGCAGGTCCGCTCCGGCGAGGCCGTCAGGCAAAAAGGCGGTCCAATAGGCAAAC
TTATGAGGTGACCATGGCATCGGAAAAGCCGCCGCGCCGCTCGAAAGCTGGAAAAGAACCGCTGACGATCGATCTCGAGG
CGGAGAAAACCGCGTCCGCGCAGACCGAAGCCACCGCTGACGGGGAAGCCGCACCCAGCCAGCCGGTGGACATGCCGCCG
AGCGAGGCGGCGGCAGCCGGTGAAGCAGGCACCGGCGGCGCCCGAAGCCGCGAAGGCGGCACCGGCGAACCTCCATTGCC
GGCAGGCGATCCGCAAGAGGAAACGGAAGAGGCACGGGCAGATGCCGCCGCTGCCGCTTTCGACGAGAAGCTTCCGCATT
CGAGCAGCGGCGAAATGCCTGAGCCGAAGAGGAGGCAGACTGCGGGTGCAGGCGCGCTTGCAGCCGGCATTCTCGGCGGC
CTCGTCGCGCTCGCCGGTGCCGGCGTGTTGCAATATGCCGGCTACATTCCTGCGCCCGGACCTGAGCGGCCTGGCACCGA
GCAGAACCTTGCGGGCGAAATCGAAGCGATAAAGGCCGAGCTCCGGGCTCAGGCTCCGGCGGCACCAGTCGACGTCGCCC
CGCTGGAAAACCGCCTTGCCGCCCTGGAAAATGCGGCGCGGGAGCCCGGCGCTGATGCGGAGGGCTCGCCTGAGGTCAAA
TCGCTCGAAGCCGAGGTCGCCAATCTGACGACCGAAATCGCCACGCTCAAAACGGAGCTTGCCGAAACCCGCCAGGCGGC
CGACGCCGCTCGAGCAGAGCTTGCCGGCCGTATCGACCAGGCGGAACAAAAGCTCAACGAGCCGGCAAACGACATCGATA
TGGCGAAAGCCGTCGCGGTGACGGCACTGAAGACGGCGATCGATCGCGGCGGGCCGTTCCTCGCAGAACTCGACGCCCTG
CGCAGCATCGCGCCCGACGATCCGGCGGTCAAGGAACTGGCGGCTGTAGCCGCAACGGGGGTCGCCACGCGCGCGGCTCT
CCGGGATAGCTTCCAGCCGGCGGCCGACGCGATGCTGAATGCGCTGCAGCAGCCCGATCCCAACCAAGGGATCTTCGATC
GCCTCGTCTCCAGCGCCATGTCGGGGATCCGTGTTCGGCCGGTCGGCAGCGTCGAGGGCGACACGCCGGAAGCGGTGATC
GCACGCATCGAGGACAAGCTCGACAATGGCGATCTCAAGGGCGCATCGCTCGAATGGAACAGCCTTCCCGAGGCGGCGAG
ATCAGCCGGCCAGAAATTCAAGGAGAAGCTTGACCGGCGGCTCAACGTGGAAACGGTGATCGATGCCGCCGTCGCCGGGA
CCATGGTTCGAACCGGTACACAAGGTTAG

Upstream 100 bases:

>100_bases
AACTTCAGCGTGTTTGCCCGGCTCATCTGAGGCATTTCCGTCAAAAAGCACGGGCAGGGGCTTTCCCTCCTCATTCTCGC
TGACTAGGTTTGCTTAGGTG

Downstream 100 bases:

>100_bases
AGCGGGATGAGGAAAAGTGTATAACGGTCTTCCGTTCGGGAATGCGTCGTTTGAAAGAGTTAGATCGTTTCGCTGCTTCA
GTGAGCCGATCTAGCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MLKRRGVPAAGPLRRGRQAKRRSNRQTYEVTMASEKPPRRSKAGKEPLTIDLEAEKTASAQTEATADGEAAPSQPVDMPP
SEAAAAGEAGTGGARSREGGTGEPPLPAGDPQEETEEARADAAAAAFDEKLPHSSSGEMPEPKRRQTAGAGALAAGILGG
LVALAGAGVLQYAGYIPAPGPERPGTEQNLAGEIEAIKAELRAQAPAAPVDVAPLENRLAALENAAREPGADAEGSPEVK
SLEAEVANLTTEIATLKTELAETRQAADAARAELAGRIDQAEQKLNEPANDIDMAKAVAVTALKTAIDRGGPFLAELDAL
RSIAPDDPAVKELAAVAATGVATRAALRDSFQPAADAMLNALQQPDPNQGIFDRLVSSAMSGIRVRPVGSVEGDTPEAVI
ARIEDKLDNGDLKGASLEWNSLPEAARSAGQKFKEKLDRRLNVETVIDAAVAGTMVRTGTQG

Sequences:

>Translated_462_residues
MLKRRGVPAAGPLRRGRQAKRRSNRQTYEVTMASEKPPRRSKAGKEPLTIDLEAEKTASAQTEATADGEAAPSQPVDMPP
SEAAAAGEAGTGGARSREGGTGEPPLPAGDPQEETEEARADAAAAAFDEKLPHSSSGEMPEPKRRQTAGAGALAAGILGG
LVALAGAGVLQYAGYIPAPGPERPGTEQNLAGEIEAIKAELRAQAPAAPVDVAPLENRLAALENAAREPGADAEGSPEVK
SLEAEVANLTTEIATLKTELAETRQAADAARAELAGRIDQAEQKLNEPANDIDMAKAVAVTALKTAIDRGGPFLAELDAL
RSIAPDDPAVKELAAVAATGVATRAALRDSFQPAADAMLNALQQPDPNQGIFDRLVSSAMSGIRVRPVGSVEGDTPEAVI
ARIEDKLDNGDLKGASLEWNSLPEAARSAGQKFKEKLDRRLNVETVIDAAVAGTMVRTGTQG
>Mature_462_residues
MLKRRGVPAAGPLRRGRQAKRRSNRQTYEVTMASEKPPRRSKAGKEPLTIDLEAEKTASAQTEATADGEAAPSQPVDMPP
SEAAAAGEAGTGGARSREGGTGEPPLPAGDPQEETEEARADAAAAAFDEKLPHSSSGEMPEPKRRQTAGAGALAAGILGG
LVALAGAGVLQYAGYIPAPGPERPGTEQNLAGEIEAIKAELRAQAPAAPVDVAPLENRLAALENAAREPGADAEGSPEVK
SLEAEVANLTTEIATLKTELAETRQAADAARAELAGRIDQAEQKLNEPANDIDMAKAVAVTALKTAIDRGGPFLAELDAL
RSIAPDDPAVKELAAVAATGVATRAALRDSFQPAADAMLNALQQPDPNQGIFDRLVSSAMSGIRVRPVGSVEGDTPEAVI
ARIEDKLDNGDLKGASLEWNSLPEAARSAGQKFKEKLDRRLNVETVIDAAVAGTMVRTGTQG

Specific function: Unknown

COG id: COG4223

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47767; Mature: 47767

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRRGVPAAGPLRRGRQAKRRSNRQTYEVTMASEKPPRRSKAGKEPLTIDLEAEKTASA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCEEEEECCCHHCCC
QTEATADGEAAPSQPVDMPPSEAAAAGEAGTGGARSREGGTGEPPLPAGDPQEETEEARA
CHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DAAAAAFDEKLPHSSSGEMPEPKRRQTAGAGALAAGILGGLVALAGAGVLQYAGYIPAPG
HHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PERPGTEQNLAGEIEAIKAELRAQAPAAPVDVAPLENRLAALENAAREPGADAEGSPEVK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
SLEAEVANLTTEIATLKTELAETRQAADAARAELAGRIDQAEQKLNEPANDIDMAKAVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TALKTAIDRGGPFLAELDALRSIAPDDPAVKELAAVAATGVATRAALRDSFQPAADAMLN
HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALQQPDPNQGIFDRLVSSAMSGIRVRPVGSVEGDTPEAVIARIEDKLDNGDLKGASLEWN
HHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
SLPEAARSAGQKFKEKLDRRLNVETVIDAAVAGTMVRTGTQG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKRRGVPAAGPLRRGRQAKRRSNRQTYEVTMASEKPPRRSKAGKEPLTIDLEAEKTASA
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCEEEEECCCHHCCC
QTEATADGEAAPSQPVDMPPSEAAAAGEAGTGGARSREGGTGEPPLPAGDPQEETEEARA
CHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DAAAAAFDEKLPHSSSGEMPEPKRRQTAGAGALAAGILGGLVALAGAGVLQYAGYIPAPG
HHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PERPGTEQNLAGEIEAIKAELRAQAPAAPVDVAPLENRLAALENAAREPGADAEGSPEVK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
SLEAEVANLTTEIATLKTELAETRQAADAARAELAGRIDQAEQKLNEPANDIDMAKAVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TALKTAIDRGGPFLAELDALRSIAPDDPAVKELAAVAATGVATRAALRDSFQPAADAMLN
HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ALQQPDPNQGIFDRLVSSAMSGIRVRPVGSVEGDTPEAVIARIEDKLDNGDLKGASLEWN
HHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH
SLPEAARSAGQKFKEKLDRRLNVETVIDAAVAGTMVRTGTQG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA