Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150398150

Identifier: 150398150

GI number: 150398150

Start: 3102488

End: 3103129

Strand: Direct

Name: 150398150

Synonym: Smed_2953

Alternate gene names: NA

Gene position: 3102488-3103129 (Clockwise)

Preceding gene: 150398149

Following gene: 150398157

Centisome position: 82.04

GC content: 60.28

Gene sequence:

>642_bases
ATGCGAGAGGCACTGATCGTCTGGGGTGGCTGGAGCGGGCATGAGCCGCAGGAATGCGCCCATATCATCCGCGACATGCT
GCAGGAGGACGGATTCAAGGTCTATCTTGAACATACGACGGAAGCCTTCGCTGACCCGTCGATTCACGACCTGTCACTGA
TCGTTCCCATAATGACCATGTCGAAGATCGAAAAGGAAGAAGTGAAGAACCTCGCTGCAGCCGTCGAGGGCGGCGTCGGC
ATCGCCGGCTATCACGGAGGCGCGGGCGATGCTTTCCGCGAGAGCGTCGAATATCAGTTCATCATTGGCGGCCAGTGGGT
GGCCCATCCCGGCAACGTCATCGATTATCGCGTGAACGTCACACGGCCGGACGACCCATTGATGAAGGGCATCTCCGATT
TCCCCTACACCTCGGAGCAATATTACATGCATGTCGACCCGTCCAACGAGGTCCTGGCCACCACGACCTTCTCCGGCGCA
CATGCGTCCTGGATCGAAGGCGTGGTGATGCCGGTGGTCTGGAAGCGCAAGCATGGGAAAGGCCGGGTCTTCTATTCCTC
GCTCGGCCACGTGGCCAAGGAGTTCGAGGTACCGGAAATGCGCACGATCTTCCGCCGCGGCGCGAACTGGGCGGCGCGCT
GA

Upstream 100 bases:

>100_bases
CCACCGTCAGCATCGCTACAACCACCGAGCGTCCGGCACCCCTGTCGGAGTCGCTCGTCGACGGCCGCATCGGCCGATAA
TTCATCAGGAGGAGTTCGAC

Downstream 100 bases:

>100_bases
GGCCTCTCCGCCTGGCGACTGGCGGAGAGGCCAGCCGCGACTTCGTCGAGCGGCGCGTCAGAGCATGCTGGATGTCGCCG
CCGTTAGGCGGCGTCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MREALIVWGGWSGHEPQECAHIIRDMLQEDGFKVYLEHTTEAFADPSIHDLSLIVPIMTMSKIEKEEVKNLAAAVEGGVG
IAGYHGGAGDAFRESVEYQFIIGGQWVAHPGNVIDYRVNVTRPDDPLMKGISDFPYTSEQYYMHVDPSNEVLATTTFSGA
HASWIEGVVMPVVWKRKHGKGRVFYSSLGHVAKEFEVPEMRTIFRRGANWAAR

Sequences:

>Translated_213_residues
MREALIVWGGWSGHEPQECAHIIRDMLQEDGFKVYLEHTTEAFADPSIHDLSLIVPIMTMSKIEKEEVKNLAAAVEGGVG
IAGYHGGAGDAFRESVEYQFIIGGQWVAHPGNVIDYRVNVTRPDDPLMKGISDFPYTSEQYYMHVDPSNEVLATTTFSGA
HASWIEGVVMPVVWKRKHGKGRVFYSSLGHVAKEFEVPEMRTIFRRGANWAAR
>Mature_213_residues
MREALIVWGGWSGHEPQECAHIIRDMLQEDGFKVYLEHTTEAFADPSIHDLSLIVPIMTMSKIEKEEVKNLAAAVEGGVG
IAGYHGGAGDAFRESVEYQFIIGGQWVAHPGNVIDYRVNVTRPDDPLMKGISDFPYTSEQYYMHVDPSNEVLATTTFSGA
HASWIEGVVMPVVWKRKHGKGRVFYSSLGHVAKEFEVPEMRTIFRRGANWAAR

Specific function: Unknown

COG id: COG3828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23836; Mature: 23836

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREALIVWGGWSGHEPQECAHIIRDMLQEDGFKVYLEHTTEAFADPSIHDLSLIVPIMTM
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHH
SKIEKEEVKNLAAAVEGGVGIAGYHGGAGDAFRESVEYQFIIGGQWVAHPGNVIDYRVNV
HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCEEEEECCEEEECCCCEEEEEEEE
TRPDDPLMKGISDFPYTSEQYYMHVDPSNEVLATTTFSGAHASWIEGVVMPVVWKRKHGK
ECCCCHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHEEECCCCC
GRVFYSSLGHVAKEFEVPEMRTIFRRGANWAAR
CEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MREALIVWGGWSGHEPQECAHIIRDMLQEDGFKVYLEHTTEAFADPSIHDLSLIVPIMTM
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHH
SKIEKEEVKNLAAAVEGGVGIAGYHGGAGDAFRESVEYQFIIGGQWVAHPGNVIDYRVNV
HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCEEEEECCEEEECCCCEEEEEEEE
TRPDDPLMKGISDFPYTSEQYYMHVDPSNEVLATTTFSGAHASWIEGVVMPVVWKRKHGK
ECCCCHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHEEECCCCC
GRVFYSSLGHVAKEFEVPEMRTIFRRGANWAAR
CEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA