Click here to switch to the map view.

The map label for this gene is 150398157

Identifier: 150398157

GI number: 150398157

Start: 3108137

End: 3108757

Strand: Direct

Name: 150398157

Synonym: Smed_2960

Alternate gene names: NA

Gene position: 3108137-3108757 (Clockwise)

Preceding gene: 150398150

Following gene: 150398163

Centisome position: 82.18

GC content: 62.96

Gene sequence:

>621_bases
ATGGACCTCCTTAAATTGGCCCGTGCAACCAAAGTTCTAGTCCTGGCCTTCGCCCTTGCGATGCCTGCCGGCCTTTCCGC
GCGCGCCGAAAGCGGCGGCGTGGGTAACGCGGAAACCGGCACCCGCCACATGCGGGGCAAGCACCGCACATCCCATCACA
TCTGGCACAAGGGGCGTCACCGTTCGGTAACGACCGTCGACGGTTTCTCGTCCTCCGCTTTCAGAAGCCCGCCGGACTTT
CAGACCAGGACCCGCCACGTGCGGCCAAGAACTCCCTGGTCCAGATTTCCCTGGCATCGTCACGCCCGCCGCGGGCGCGA
CCATCGTCCCGTGGTCATCATCGGTGGCGGCGAACATTCCTTCGGCGGTGACGGCGGCCACGGGAATCACGACTTCCCCA
CGCCTATTTCGGATATCGGCACCTATGCCGGCGGCCTTTCGGCTTATCGTGACGAAGGCAACGGCATCTATTTCAGCCGG
GACGGCGGCTACTCCTACCTTGCCGGGGATACCATCGTACGCAATACATCTTCGAAACGCGCGAAGATCATCATCCTATC
GCCTCAGGTCAATGCCAGCGCATGCTCGTGGGAGCGCGGCGTCTGCGTCGTTCGGCCGTAG

Upstream 100 bases:

>100_bases
GGATAGATGCAAAAAACGGTGTGAAATCCGTGACATTTGCGGGCTCTTGCCTCAGGATGCGCTTTAACGCTTCGTTAAAG
ATGTCCGGGGGCATTGCGGT

Downstream 100 bases:

>100_bases
GAGGCGGACGCTCCCGTCGATCGTCGCTGTCACGAGGCCGCCTGACCGAATCGCCAGACCGTCGTGCGCTTCACCTCGCA
GTCTTCGAGCGCCCGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDLLKLARATKVLVLAFALAMPAGLSARAESGGVGNAETGTRHMRGKHRTSHHIWHKGRHRSVTTVDGFSSSAFRSPPDF
QTRTRHVRPRTPWSRFPWHRHARRGRDHRPVVIIGGGEHSFGGDGGHGNHDFPTPISDIGTYAGGLSAYRDEGNGIYFSR
DGGYSYLAGDTIVRNTSSKRAKIIILSPQVNASACSWERGVCVVRP

Sequences:

>Translated_206_residues
MDLLKLARATKVLVLAFALAMPAGLSARAESGGVGNAETGTRHMRGKHRTSHHIWHKGRHRSVTTVDGFSSSAFRSPPDF
QTRTRHVRPRTPWSRFPWHRHARRGRDHRPVVIIGGGEHSFGGDGGHGNHDFPTPISDIGTYAGGLSAYRDEGNGIYFSR
DGGYSYLAGDTIVRNTSSKRAKIIILSPQVNASACSWERGVCVVRP
>Mature_206_residues
MDLLKLARATKVLVLAFALAMPAGLSARAESGGVGNAETGTRHMRGKHRTSHHIWHKGRHRSVTTVDGFSSSAFRSPPDF
QTRTRHVRPRTPWSRFPWHRHARRGRDHRPVVIIGGGEHSFGGDGGHGNHDFPTPISDIGTYAGGLSAYRDEGNGIYFSR
DGGYSYLAGDTIVRNTSSKRAKIIILSPQVNASACSWERGVCVVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22561; Mature: 22561

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKLARATKVLVLAFALAMPAGLSARAESGGVGNAETGTRHMRGKHRTSHHIWHKGRH
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCC
RSVTTVDGFSSSAFRSPPDFQTRTRHVRPRTPWSRFPWHRHARRGRDHRPVVIIGGGEHS
CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCC
FGGDGGHGNHDFPTPISDIGTYAGGLSAYRDEGNGIYFSRDGGYSYLAGDTIVRNTSSKR
CCCCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCEEEEECCCCEEEEECCEEEECCCCCC
AKIIILSPQVNASACSWERGVCVVRP
EEEEEECCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MDLLKLARATKVLVLAFALAMPAGLSARAESGGVGNAETGTRHMRGKHRTSHHIWHKGRH
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCC
RSVTTVDGFSSSAFRSPPDFQTRTRHVRPRTPWSRFPWHRHARRGRDHRPVVIIGGGEHS
CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCC
FGGDGGHGNHDFPTPISDIGTYAGGLSAYRDEGNGIYFSRDGGYSYLAGDTIVRNTSSKR
CCCCCCCCCCCCCCCHHHHHHHHCCCHHEEECCCEEEEECCCCEEEEECCEEEECCCCCC
AKIIILSPQVNASACSWERGVCVVRP
EEEEEECCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA