| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150398132
Identifier: 150398132
GI number: 150398132
Start: 3081661
End: 3082155
Strand: Reverse
Name: 150398132
Synonym: Smed_2935
Alternate gene names: NA
Gene position: 3082155-3081661 (Counterclockwise)
Preceding gene: 150398133
Following gene: 150398129
Centisome position: 81.5
GC content: 65.86
Gene sequence:
>495_bases ATGAGACCACGAAGCGTTGCCGCCGGCCTGCCGAACGCCTGGCTTCCCGGAGCCGACTGGTCGGACCGCCACGAACTTCT CGTCTTCGGCGAGCGAATGACGGCGGCGGAGGCGGCGAGAGCGCTTGGAAGCGCACCTGGCTGGGTGCGGAGTCTTCTCG CATTGCGCAACCGCTTCGCCTCTCTCATCGGTCTGAACGCAGCCGCGCCCCCCGCGCATTCCGGCCTGATCGGCACTTTT CCGCTGCTGCACAGCGACGATCGCGAAGCCGTCGTCGGCTATGACGACCGCCACCTGGATTTCCGCATCGTCGTGGATGT GCGCGAAGGGCCGGCCGATAGCCAGATCATCGGCATGACCACCCTGGTGCGCCGCAGGAATCTATTCGGCCGGCTCTATC TCGCTGCAGTCATGCCCTTCCACAAGGCGATCGTCCCGACATTACTGGCGGGGGTGAACGACCGGTCGCGAGCGCCGGTC ATTCCTCCCGCGTAA
Upstream 100 bases:
>100_bases CCCTCGCTTCGTGCCGGCAACCGGCGCAATCATGAACCACTCACCGCAGACATGACCGCCTCCGATCGGCGGGAGCGGCG AAAGCGAAAGGGAAGCGTTC
Downstream 100 bases:
>100_bases CCTTAAAACCCTCTTGCCGCAGAAGTTCGACCAGGCCTTCCTTGCCCGGAAGATGCAGCGCGCCCACGGCCATGAAGGCG CCGCCGTCCCTCAGGATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRPRSVAAGLPNAWLPGADWSDRHELLVFGERMTAAEAARALGSAPGWVRSLLALRNRFASLIGLNAAAPPAHSGLIGTF PLLHSDDREAVVGYDDRHLDFRIVVDVREGPADSQIIGMTTLVRRRNLFGRLYLAAVMPFHKAIVPTLLAGVNDRSRAPV IPPA
Sequences:
>Translated_164_residues MRPRSVAAGLPNAWLPGADWSDRHELLVFGERMTAAEAARALGSAPGWVRSLLALRNRFASLIGLNAAAPPAHSGLIGTF PLLHSDDREAVVGYDDRHLDFRIVVDVREGPADSQIIGMTTLVRRRNLFGRLYLAAVMPFHKAIVPTLLAGVNDRSRAPV IPPA >Mature_164_residues MRPRSVAAGLPNAWLPGADWSDRHELLVFGERMTAAEAARALGSAPGWVRSLLALRNRFASLIGLNAAAPPAHSGLIGTF PLLHSDDREAVVGYDDRHLDFRIVVDVREGPADSQIIGMTTLVRRRNLFGRLYLAAVMPFHKAIVPTLLAGVNDRSRAPV IPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17775; Mature: 17775
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRSVAAGLPNAWLPGADWSDRHELLVFGERMTAAEAARALGSAPGWVRSLLALRNRFA CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLIGLNAAAPPAHSGLIGTFPLLHSDDREAVVGYDDRHLDFRIVVDVREGPADSQIIGMT HHHCCCCCCCCCCCCCEECCCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCEEHHHH TLVRRRNLFGRLYLAAVMPFHKAIVPTLLAGVNDRSRAPVIPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRPRSVAAGLPNAWLPGADWSDRHELLVFGERMTAAEAARALGSAPGWVRSLLALRNRFA CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLIGLNAAAPPAHSGLIGTFPLLHSDDREAVVGYDDRHLDFRIVVDVREGPADSQIIGMT HHHCCCCCCCCCCCCCEECCCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCEEHHHH TLVRRRNLFGRLYLAAVMPFHKAIVPTLLAGVNDRSRAPVIPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA