| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398087
Identifier: 150398087
GI number: 150398087
Start: 3031174
End: 3031653
Strand: Reverse
Name: 150398087
Synonym: Smed_2889
Alternate gene names: NA
Gene position: 3031653-3031174 (Counterclockwise)
Preceding gene: 150398088
Following gene: 150398083
Centisome position: 80.16
GC content: 65.42
Gene sequence:
>480_bases ATGGCCAGTTATTCCGGCGCGCCGTCGGTGCGTCAGATCTGCATAAAGCTCTTCGTCAGGCATGGGGACGAAGAGCGGGC GATTGCGTTCTACCGCGATGTGTTCGGCGCCGAATTGCTTCAGAAGCATGAGTGGAGCGGCATTCTGACGAGCGCCGATC TCTCCATCGGCGACTCGGTTTTCCGGGTGGCCGGTGCCAATCCGCGCCGGGACGCCGAACCGCGGCTCGGCGGCCCGCGA TCTCCGCACGCCCTCGGCACGACCGCGGCAATCCTCGAACTTCATGTGGATGATGTGGACCGCGTGCTCGAGCGTGCCAT CGGAAGTGGCGCCAGTCTGCGCAACGTGGCCGAAACGCTGCCGACCGGCGACCGCGTCGGCGCTCTCATCGATCCGTTCG GTCACATCTGGGCGTTGTTCACGGCAACGGGCGAGAGCGAGGCGCTGGATGCGTTCGGAGTCGACCGCAATGCCGCGTGA
Upstream 100 bases:
>100_bases AGTACGGGCGCGGTCTTCGCGGCGGTCTCATTATTGAACAATGGCGTTTTTGATCCCGGGTTCCACCCGCCCGAAATCAT CGCGTGCCAGGGAGGTTGCC
Downstream 100 bases:
>100_bases GGCGGGCGGAAAACTGCACACACTTTTCGCGCTTTAAGGCAGGCTCCGTCATCCGAACCGCTGAATGATCGGCGCAATGC ACAGTCCGCCGTGACCGATC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; PhnB Protein
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MASYSGAPSVRQICIKLFVRHGDEERAIAFYRDVFGAELLQKHEWSGILTSADLSIGDSVFRVAGANPRRDAEPRLGGPR SPHALGTTAAILELHVDDVDRVLERAIGSGASLRNVAETLPTGDRVGALIDPFGHIWALFTATGESEALDAFGVDRNAA
Sequences:
>Translated_159_residues MASYSGAPSVRQICIKLFVRHGDEERAIAFYRDVFGAELLQKHEWSGILTSADLSIGDSVFRVAGANPRRDAEPRLGGPR SPHALGTTAAILELHVDDVDRVLERAIGSGASLRNVAETLPTGDRVGALIDPFGHIWALFTATGESEALDAFGVDRNAA >Mature_158_residues ASYSGAPSVRQICIKLFVRHGDEERAIAFYRDVFGAELLQKHEWSGILTSADLSIGDSVFRVAGANPRRDAEPRLGGPRS PHALGTTAAILELHVDDVDRVLERAIGSGASLRNVAETLPTGDRVGALIDPFGHIWALFTATGESEALDAFGVDRNAA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17009; Mature: 16878
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYSGAPSVRQICIKLFVRHGDEERAIAFYRDVFGAELLQKHEWSGILTSADLSIGDSV CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH FRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAIGSGASLRNVAETL HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC PTGDRVGALIDPFGHIWALFTATGESEALDAFGVDRNAA CCCCCCHHHHCHHHHHHHHHHCCCCCHHHHHHCCCCCCC >Mature Secondary Structure ASYSGAPSVRQICIKLFVRHGDEERAIAFYRDVFGAELLQKHEWSGILTSADLSIGDSV CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH FRVAGANPRRDAEPRLGGPRSPHALGTTAAILELHVDDVDRVLERAIGSGASLRNVAETL HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC PTGDRVGALIDPFGHIWALFTATGESEALDAFGVDRNAA CCCCCCHHHHCHHHHHHHHHHCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA