| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cutL [H]
Identifier: 150398080
GI number: 150398080
Start: 3016491
End: 3018836
Strand: Reverse
Name: cutL [H]
Synonym: Smed_2882
Alternate gene names: 150398080
Gene position: 3018836-3016491 (Counterclockwise)
Preceding gene: 150398081
Following gene: 150398079
Centisome position: 79.82
GC content: 62.92
Gene sequence:
>2346_bases ATGGGTGTTGAAGGCATCGGCGCGCGCGTGGCGCGTAAGGAAGACAAACGCTTCCTGACCGGAAAGGGGCGCTACACGGA CGACATGGTCGTTCCGGGCATGAAATATGCGGCTTTCGTCCGCAGCCCGCATGCGCATGCCACGATAAGGAGCATCGACG TGGCATCGGCCAAGGCCATGCCAGGGGTGATCGACGTCCTCGACGGCAAGCAATTGCTGGCGGACGGGATCGGCAATCTC ATCTGCGGCTGGATGATCCATTCGAAAGACGGCTCTCCCATGCGCATGGGCGCCTGGCGGCCGCTCGCGGACAAGACGGT GCGTTATGTCGGAGACGCAGTGGCGATCGTTGTCGCCGACAGCGTTGCGGAGGCGCGCGACGCGGCGGAAGCTGTGGTCA TCGATTACGAAACCCTGCCGGTCGTCACCGACCTTGTCGAGGCGCTGGGCGAAGGCCAGCCGCAGATCCATCCGGAAGCA CCGGGCAACCTGATCTTCGATTGGGAAATCGGCGATGCCGGCGCGACCGACCAGGCGATCGCCGCTGCGGCGCACGTGAC GGAGTTGAAGATCGTCAATAACCGCCTGTCTCCAAATGCGATGGAGCCGCGTGCGACGCTCGGAATCTACGATGCCGGCG ACGACCATTTCACCTGCTACACCACGAGCCAGAACCCACATCTTGCGCGGCTGGTGATGAGTGCCTTTTATAATGTCGCG CCCGAGAACAAGCTGCGGGTAATCGCTCCCGACGTCGGCGGCGGATTCGGCTCCAAGATTTTCATCTATCCGGAAGAGAT CGTCTGTCTCTGGGCCTCGAAGCGCACCGGCGTGCCGGTGAAATGGACGGCGGACCGTACCGAGGCCTTCCTGACGGATG CGCACGGCCGCGACCATGTGTCTACCGTGAAGATGGCCTTCGACAGCAGCAACCGGATCACGGCGCTGAAGGTCGACACC ATCGCCAATCTCGGCGCCTATATGTCGCTGTTTTCCTCCTGTGTGCCGACCTATCTCTATGCGACGCTCCTTTCCGGGCA ATATGCGATTCCGGCGATCCACGCGAATGTCCGCACGGTCTATACCAATACCGCACCGGTGGACGCCTATCGCGGTGCCG GGCGGCCGGAAGCCACCTACCTTCTGGAGCGCACGATGGAGACGGCCGCGCGCGAGCTCGGGCTTTCTCCCGCGGAACTC AGACGCATCAACTTCATCCGTTCATTCCCGCATCAGACGCCGGTGATCATGAACTACGATGCCGGCGATTACGAAGCATC GCTCACGGCGGCAATGAAGACGGTCGACTGGGACGGCTTCGCCGCACGCAAGGCGGAAGCCGAGGGTCGGGGGATGAAGC GCGGCATCGGCATGAGTTGCTATATCGAGGCCTGCGGACTGGCTCCGTCGGCAGCCGTCGGCTCGCTCGGCGCGGGCGTC GGCCTGTGGGAATCGGCCGAGGTCAGGGTCAACGCGGTCGGTACAATCGAGGTGATGACAGGCTCTCACAGCCACGGCCA GGGGCACGAGACGACCTTTGCCCAGGTTGTGGCGGAGCGTTTCGGTGTGCCGATCGACAGTGTCAATATCGTCCATGGCG ATACGGACAAAGTGCAGATGGGCATGGGTACCTATGGTTCCCGCTCCGGCGCCGTCGGGATGTCGGCCGTCTTCAAGGCG CTCGACAAGGTAGAAGCCAAAGCGAAGAAGATCGCGGCGCACCTGATGGAGGCCGACGAGAGCGATATCGTCATCGAGAA CGGCGCCCTCAAGGTCGCCGGCACCGACCGGGAGGTCCCCTGGTCGCAGGTGGCGCTCGCCTCCTATACGGCCCATAATC TGCCGCCCGGCATGGAACCGGGTCTGAAGGAAGGTGCCTTCTACGATCCGAGCAATTTCACCTTCCCGGCCGGCTGCTAT ATCTGTGAAGTGGAGGTGGATCCGGAAACAGGTCAGACGAAGATCGTCCAATTCGTCGCGGCAGACGATTTCGGCAATAT CATCAACCCGTTGATCGTCGAAGGGCAGGTGCATGGGGGACTGGCGCAGGGCATCGGCCAGGCGCTGCTCGAAGGGGTGC ATTACGACAAGAGCGGCCAATTGCTGACGGCGAGCTATATGGATTATGCCATGCCGCGCGCCGACGATCTGCCTTCGTTC AAGGTGACGACTTCGAACACGCCCTGCCCGAGCAACCCGCTCGGCGTCAAGGGCTGCGGCGAGGCGGGGGCGATCGGCTC GCCGCCAGCCCTGATCAACGCGATCACCGACGCCATCGGCAACAACGAGCTCACCATGCCGGCGACGCCACAGAAGGTCT GGGCCGCGGCGCGGGCCATATCTTGA
Upstream 100 bases:
>100_bases AAGAAATCCCTGAGGGAGCGCGATGCGGGGGGAGCGCCGCCGCATTTTTCGTCATTCCGCAAACGGAAATTCGTTACTGG ATTTCGGGAGGAGACAGGCA
Downstream 100 bases:
>100_bases TTGGGAGGACGACATATGTACGAGACCAACTATCATAGGGCCGCCTCGATCGAGGAGGCGGCAAAGCTGATGGGGACCGT GGCGGAGGGCAAATATCTCT
Product: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MGVEGIGARVARKEDKRFLTGKGRYTDDMVVPGMKYAAFVRSPHAHATIRSIDVASAKAMPGVIDVLDGKQLLADGIGNL ICGWMIHSKDGSPMRMGAWRPLADKTVRYVGDAVAIVVADSVAEARDAAEAVVIDYETLPVVTDLVEALGEGQPQIHPEA PGNLIFDWEIGDAGATDQAIAAAAHVTELKIVNNRLSPNAMEPRATLGIYDAGDDHFTCYTTSQNPHLARLVMSAFYNVA PENKLRVIAPDVGGGFGSKIFIYPEEIVCLWASKRTGVPVKWTADRTEAFLTDAHGRDHVSTVKMAFDSSNRITALKVDT IANLGAYMSLFSSCVPTYLYATLLSGQYAIPAIHANVRTVYTNTAPVDAYRGAGRPEATYLLERTMETAARELGLSPAEL RRINFIRSFPHQTPVIMNYDAGDYEASLTAAMKTVDWDGFAARKAEAEGRGMKRGIGMSCYIEACGLAPSAAVGSLGAGV GLWESAEVRVNAVGTIEVMTGSHSHGQGHETTFAQVVAERFGVPIDSVNIVHGDTDKVQMGMGTYGSRSGAVGMSAVFKA LDKVEAKAKKIAAHLMEADESDIVIENGALKVAGTDREVPWSQVALASYTAHNLPPGMEPGLKEGAFYDPSNFTFPAGCY ICEVEVDPETGQTKIVQFVAADDFGNIINPLIVEGQVHGGLAQGIGQALLEGVHYDKSGQLLTASYMDYAMPRADDLPSF KVTTSNTPCPSNPLGVKGCGEAGAIGSPPALINAITDAIGNNELTMPATPQKVWAAARAIS
Sequences:
>Translated_781_residues MGVEGIGARVARKEDKRFLTGKGRYTDDMVVPGMKYAAFVRSPHAHATIRSIDVASAKAMPGVIDVLDGKQLLADGIGNL ICGWMIHSKDGSPMRMGAWRPLADKTVRYVGDAVAIVVADSVAEARDAAEAVVIDYETLPVVTDLVEALGEGQPQIHPEA PGNLIFDWEIGDAGATDQAIAAAAHVTELKIVNNRLSPNAMEPRATLGIYDAGDDHFTCYTTSQNPHLARLVMSAFYNVA PENKLRVIAPDVGGGFGSKIFIYPEEIVCLWASKRTGVPVKWTADRTEAFLTDAHGRDHVSTVKMAFDSSNRITALKVDT IANLGAYMSLFSSCVPTYLYATLLSGQYAIPAIHANVRTVYTNTAPVDAYRGAGRPEATYLLERTMETAARELGLSPAEL RRINFIRSFPHQTPVIMNYDAGDYEASLTAAMKTVDWDGFAARKAEAEGRGMKRGIGMSCYIEACGLAPSAAVGSLGAGV GLWESAEVRVNAVGTIEVMTGSHSHGQGHETTFAQVVAERFGVPIDSVNIVHGDTDKVQMGMGTYGSRSGAVGMSAVFKA LDKVEAKAKKIAAHLMEADESDIVIENGALKVAGTDREVPWSQVALASYTAHNLPPGMEPGLKEGAFYDPSNFTFPAGCY ICEVEVDPETGQTKIVQFVAADDFGNIINPLIVEGQVHGGLAQGIGQALLEGVHYDKSGQLLTASYMDYAMPRADDLPSF KVTTSNTPCPSNPLGVKGCGEAGAIGSPPALINAITDAIGNNELTMPATPQKVWAAARAIS >Mature_780_residues GVEGIGARVARKEDKRFLTGKGRYTDDMVVPGMKYAAFVRSPHAHATIRSIDVASAKAMPGVIDVLDGKQLLADGIGNLI CGWMIHSKDGSPMRMGAWRPLADKTVRYVGDAVAIVVADSVAEARDAAEAVVIDYETLPVVTDLVEALGEGQPQIHPEAP GNLIFDWEIGDAGATDQAIAAAAHVTELKIVNNRLSPNAMEPRATLGIYDAGDDHFTCYTTSQNPHLARLVMSAFYNVAP ENKLRVIAPDVGGGFGSKIFIYPEEIVCLWASKRTGVPVKWTADRTEAFLTDAHGRDHVSTVKMAFDSSNRITALKVDTI ANLGAYMSLFSSCVPTYLYATLLSGQYAIPAIHANVRTVYTNTAPVDAYRGAGRPEATYLLERTMETAARELGLSPAELR RINFIRSFPHQTPVIMNYDAGDYEASLTAAMKTVDWDGFAARKAEAEGRGMKRGIGMSCYIEACGLAPSAAVGSLGAGVG LWESAEVRVNAVGTIEVMTGSHSHGQGHETTFAQVVAERFGVPIDSVNIVHGDTDKVQMGMGTYGSRSGAVGMSAVFKAL DKVEAKAKKIAAHLMEADESDIVIENGALKVAGTDREVPWSQVALASYTAHNLPPGMEPGLKEGAFYDPSNFTFPAGCYI CEVEVDPETGQTKIVQFVAADDFGNIINPLIVEGQVHGGLAQGIGQALLEGVHYDKSGQLLTASYMDYAMPRADDLPSFK VTTSNTPCPSNPLGVKGCGEAGAIGSPPALINAITDAIGNNELTMPATPQKVWAAARAIS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=797, Percent_Identity=26.3488080301129, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI91823271, Length=800, Percent_Identity=25.125, Blast_Score=157, Evalue=5e-38, Organism=Escherichia coli, GI1789230, Length=775, Percent_Identity=31.3548387096774, Blast_Score=280, Evalue=3e-76, Organism=Escherichia coli, GI1789246, Length=827, Percent_Identity=27.0858524788392, Blast_Score=224, Evalue=2e-59, Organism=Escherichia coli, GI1786478, Length=767, Percent_Identity=25.03259452412, Blast_Score=120, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17539860, Length=800, Percent_Identity=24.375, Blast_Score=147, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17540638, Length=828, Percent_Identity=24.2753623188406, Blast_Score=139, Evalue=6e-33, Organism=Caenorhabditis elegans, GI32566215, Length=577, Percent_Identity=24.0901213171577, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI17737937, Length=792, Percent_Identity=24.7474747474747, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83043; Mature: 82912
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVEGIGARVARKEDKRFLTGKGRYTDDMVVPGMKYAAFVRSPHAHATIRSIDVASAKAM CCCCCCCHHHHHHCCCEEEECCCCCCCCEECCCCHHHHHHCCCCCCEEEEEEEHHHHCCC PGVIDVLDGKQLLADGIGNLICGWMIHSKDGSPMRMGAWRPLADKTVRYVGDAVAIVVAD CCEEEECCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCCHHHHHHHHHCCEEEEEEEH SVAEARDAAEAVVIDYETLPVVTDLVEALGEGQPQIHPEAPGNLIFDWEIGDAGATDQAI HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH AAAAHVTELKIVNNRLSPNAMEPRATLGIYDAGDDHFTCYTTSQNPHLARLVMSAFYNVA HHHHHHHEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCC PENKLRVIAPDVGGGFGSKIFIYPEEIVCLWASKRTGVPVKWTADRTEAFLTDAHGRDHV CCCCEEEEECCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCC STVKMAFDSSNRITALKVDTIANLGAYMSLFSSCVPTYLYATLLSGQYAIPAIHANVRTV EEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCEEEE YTNTAPVDAYRGAGRPEATYLLERTMETAARELGLSPAELRRINFIRSFPHQTPVIMNYD EECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECC AGDYEASLTAAMKTVDWDGFAARKAEAEGRGMKRGIGMSCYIEACGLAPSAAVGSLGAGV CCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHCCCCCC GLWESAEVRVNAVGTIEVMTGSHSHGQGHETTFAQVVAERFGVPIDSVNIVHGDTDKVQM CCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE GMGTYGSRSGAVGMSAVFKALDKVEAKAKKIAAHLMEADESDIVIENGALKVAGTDREVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC WSQVALASYTAHNLPPGMEPGLKEGAFYDPSNFTFPAGCYICEVEVDPETGQTKIVQFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEE ADDFGNIINPLIVEGQVHGGLAQGIGQALLEGVHYDKSGQLLTASYMDYAMPRADDLPSF CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCCCCE KVTTSNTPCPSNPLGVKGCGEAGAIGSPPALINAITDAIGNNELTMPATPQKVWAAARAI EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHC S C >Mature Secondary Structure GVEGIGARVARKEDKRFLTGKGRYTDDMVVPGMKYAAFVRSPHAHATIRSIDVASAKAM CCCCCCHHHHHHCCCEEEECCCCCCCCEECCCCHHHHHHCCCCCCEEEEEEEHHHHCCC PGVIDVLDGKQLLADGIGNLICGWMIHSKDGSPMRMGAWRPLADKTVRYVGDAVAIVVAD CCEEEECCCHHHHHHHHHHHEEEEEEECCCCCCEECCCCCCHHHHHHHHHCCEEEEEEEH SVAEARDAAEAVVIDYETLPVVTDLVEALGEGQPQIHPEAPGNLIFDWEIGDAGATDQAI HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH AAAAHVTELKIVNNRLSPNAMEPRATLGIYDAGDDHFTCYTTSQNPHLARLVMSAFYNVA HHHHHHHEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCC PENKLRVIAPDVGGGFGSKIFIYPEEIVCLWASKRTGVPVKWTADRTEAFLTDAHGRDHV CCCCEEEEECCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCC STVKMAFDSSNRITALKVDTIANLGAYMSLFSSCVPTYLYATLLSGQYAIPAIHANVRTV EEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCEEEE YTNTAPVDAYRGAGRPEATYLLERTMETAARELGLSPAELRRINFIRSFPHQTPVIMNYD EECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECC AGDYEASLTAAMKTVDWDGFAARKAEAEGRGMKRGIGMSCYIEACGLAPSAAVGSLGAGV CCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHCCCCCC GLWESAEVRVNAVGTIEVMTGSHSHGQGHETTFAQVVAERFGVPIDSVNIVHGDTDKVQM CCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE GMGTYGSRSGAVGMSAVFKALDKVEAKAKKIAAHLMEADESDIVIENGALKVAGTDREVP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC WSQVALASYTAHNLPPGMEPGLKEGAFYDPSNFTFPAGCYICEVEVDPETGQTKIVQFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEE ADDFGNIINPLIVEGQVHGGLAQGIGQALLEGVHYDKSGQLLTASYMDYAMPRADDLPSF CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCCCCCCCE KVTTSNTPCPSNPLGVKGCGEAGAIGSPPALINAITDAIGNNELTMPATPQKVWAAARAI EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]