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The map label for this gene is phaC [H]

Identifier: 150398005

GI number: 150398005

Start: 2934281

End: 2934628

Strand: Direct

Name: phaC [H]

Synonym: Smed_2807

Alternate gene names: 150398005

Gene position: 2934281-2934628 (Clockwise)

Preceding gene: 150398004

Following gene: 150398006

Centisome position: 77.59

GC content: 61.49

Gene sequence:

>348_bases
ATGGAACTCATTCTCGCAGGCGGTATAGGCACCCTGACCGCGTCAGGCGTTTATCTTCTTTTGAGGCCCCGAACATACCA
GGTCATCATCGGGCTTTCGCTGCTCTCCTTTGCCGTCAATCTCTTCATCTTCGGCATGGGCAGGTTGCGGGTGAACGCCC
CGCCGATCCTCGAGCCCGGGGGCGCAGGCGATCTCGCCCGCTTTACCGATCCGGTTCCTCAGGCTCTGGTGCTGACGGCG
ATCGTCATCGGCTTCGCGATGACAGCACTGTTCCTCGTGGTACTGCTTGCCTCGCGCGGCTTCACCGGAACCGACCATGT
GGACGGAAGGGAGCAGCGCGGTGACTGA

Upstream 100 bases:

>100_bases
GCCACCGTGCTCATCCTGATCGCGCTGGCGCACCAGTCAGTGCGTGCACCGCGTGCGCAAGCAAGGGCTGCGCGCTCCGA
GAAGGGAGCGGTATCGTAAA

Downstream 100 bases:

>100_bases
TTGGCTCCATCATCTTCTCATATTGCCGATCCTCCTGCCGCTCGCCGTCGCCGCGGTTCTGATCCCGATCAACGAGCGGG
ACCGCACAGTGAAGGGCGCC

Product: putative monovalent cation/H+ antiporter subunit C

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein C; Pha system subunit C [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MELILAGGIGTLTASGVYLLLRPRTYQVIIGLSLLSFAVNLFIFGMGRLRVNAPPILEPGGAGDLARFTDPVPQALVLTA
IVIGFAMTALFLVVLLASRGFTGTDHVDGREQRGD

Sequences:

>Translated_115_residues
MELILAGGIGTLTASGVYLLLRPRTYQVIIGLSLLSFAVNLFIFGMGRLRVNAPPILEPGGAGDLARFTDPVPQALVLTA
IVIGFAMTALFLVVLLASRGFTGTDHVDGREQRGD
>Mature_115_residues
MELILAGGIGTLTASGVYLLLRPRTYQVIIGLSLLSFAVNLFIFGMGRLRVNAPPILEPGGAGDLARFTDPVPQALVLTA
IVIGFAMTALFLVVLLASRGFTGTDHVDGREQRGD

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG1006

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006673
- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: NA

Molecular weight: Translated: 12155; Mature: 12155

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELILAGGIGTLTASGVYLLLRPRTYQVIIGLSLLSFAVNLFIFGMGRLRVNAPPILEPG
CEEEEECCCCHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
GAGDLARFTDPVPQALVLTAIVIGFAMTALFLVVLLASRGFTGTDHVDGREQRGD
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MELILAGGIGTLTASGVYLLLRPRTYQVIIGLSLLSFAVNLFIFGMGRLRVNAPPILEPG
CEEEEECCCCHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
GAGDLARFTDPVPQALVLTAIVIGFAMTALFLVVLLASRGFTGTDHVDGREQRGD
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]