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The map label for this gene is ydgJ [C]

Identifier: 150397985

GI number: 150397985

Start: 2905673

End: 2906857

Strand: Reverse

Name: ydgJ [C]

Synonym: Smed_2787

Alternate gene names: 150397985

Gene position: 2906857-2905673 (Counterclockwise)

Preceding gene: 150397986

Following gene: 150397984

Centisome position: 76.86

GC content: 62.7

Gene sequence:

>1185_bases
ATGGCAATCGAGGGAAGCAGTACGGAAACGCGTCAGAAGCGGATCCGACTCGGCATGGTGGGCGGCGGCTCCGGCGCCTT
TATCGGCGCGGTACATCGGATCGCCGCCAGGCTCGACGATCACTACGAGCTTGTTGCCGGCGCGCTCTCGTCGACGCCGG
AGAAGGCCGAGGCCTCGGGTCGCGAACTCGGGCTCGACCCGTCGCGCGTCTATTCGGATTACAAGGAGATGGCGATTCGC
GAGGCGAAGCTCAAGAACGGCATAGAAGCGGTCGCGATCGTCACGCCGAACCATGTACATTATGCGGCGGCAAAGGAGTT
CCTGAAGCGCGGCATCCATGTCATCTGCGATAAGCCCCTGACCTCGACGCTCGCCGATGCGAAGAAGCTTAAGAAGGCGG
CTGAGGAGAGCGAGGCGCTCTTCGTGCTCACGCATAATTATACCGGCTATCCGATGGTACGCCAGGCGCGCGAGATGATC
GCCAATGGCGACATCGGAGCCGTCCGCCTCGTGCAGATGGAATATCCGCAGGACTGGCTGACCGAGAACATCGAGCAATC
CGGTCAGAAGCAGGCCGCCTGGCGAACCGATCCGGCGCGTTCGGGCGCCGGCGGCTCGACCGGCGATATCGGCACGCATG
CCTATAATCTCGGTTGCTTCGTTTCCGGGCTTGAACTCGAAGAGCTTTGCGCCGATCTCGACAGCTTCGTCGGCGGACGT
CAGCTCGACGACAACGCCCATGTGCTGATGCGCTTCAAGGAAAAGGGCGGCGCGCGCGCCAAGGGGATGCTCTGGTGCAG
CCAGGTGGCACCCGGCCACGAAAACGGCCTGATGGTACGTGTCTACGGCACGAAAGGCGGCCTTGAATGGACCCAGAAGG
ACCCGAACTACCTCTGGTACACGCCTTTCGGTGAGCCGAAGCGTCTGCTGACGCGCGCCGGCGCCGGGGCTTCGCCAGCG
GCAGCACGCGTGTCGCGCATTCCTTCGGGCCATCCGGAAGGGTATCTGGAAGGCTTCGCCAACATCTATACGGAAGCGGC
GCGGGCGATCTATGCCAAGCGCAATGGCGGGAAAGCGGACCCGGCTGTCGTCTATCCGACGCTCGACGACGGTATGAAGG
GTATGATTTTCGTCGATGCCTGCGTGCGCTCGTCTCAACGCAACGGCGCCTGGATCAAGATCTGA

Upstream 100 bases:

>100_bases
GGGGAGGCATCGCCGCGACCTTCTCCCCGGTTGCGGGGAGAAGGTCGCGGCAGCGGGATGAGGGGAATTCCACGCGAAAC
ATTCAAGGAGAGGAAGCAGA

Downstream 100 bases:

>100_bases
ACAATTCCGCGATGCGGAAAAGCGGGGTGCTCAGAACAGGATGAGGGAAAGTGCGCGGTTTTCCGCCCGCATCCCGCTCT
ATCTTCCTGGAATTGATCAC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MAIEGSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDYKEMAIR
EAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAAEESEALFVLTHNYTGYPMVRQAREMI
ANGDIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELCADLDSFVGGR
QLDDNAHVLMRFKEKGGARAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWYTPFGEPKRLLTRAGAGASPA
AARVSRIPSGHPEGYLEGFANIYTEAARAIYAKRNGGKADPAVVYPTLDDGMKGMIFVDACVRSSQRNGAWIKI

Sequences:

>Translated_394_residues
MAIEGSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDYKEMAIR
EAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAAEESEALFVLTHNYTGYPMVRQAREMI
ANGDIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELCADLDSFVGGR
QLDDNAHVLMRFKEKGGARAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWYTPFGEPKRLLTRAGAGASPA
AARVSRIPSGHPEGYLEGFANIYTEAARAIYAKRNGGKADPAVVYPTLDDGMKGMIFVDACVRSSQRNGAWIKI
>Mature_393_residues
AIEGSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDYKEMAIRE
AKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAAEESEALFVLTHNYTGYPMVRQAREMIA
NGDIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELCADLDSFVGGRQ
LDDNAHVLMRFKEKGGARAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWYTPFGEPKRLLTRAGAGASPAA
ARVSRIPSGHPEGYLEGFANIYTEAARAIYAKRNGGKADPAVVYPTLDDGMKGMIFVDACVRSSQRNGAWIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42719; Mature: 42588

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEGSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASG
CCCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCC
RELGLDPSRVYSDYKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCH
TSTLADAKKLKKAAEESEALFVLTHNYTGYPMVRQAREMIANGDIGAVRLVQMEYPQDWL
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHH
TENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELCADLDSFVGGR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCHHHHHHHHHHHCCCC
QLDDNAHVLMRFKEKGGARAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWY
CCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEE
TPFGEPKRLLTRAGAGASPAAARVSRIPSGHPEGYLEGFANIYTEAARAIYAKRNGGKAD
CCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAVVYPTLDDGMKGMIFVDACVRSSQRNGAWIKI
CEEEEECCCCCCCCEEEEEHHHCCCCCCCCEEEC
>Mature Secondary Structure 
AIEGSSTETRQKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASG
CCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCC
RELGLDPSRVYSDYKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCH
TSTLADAKKLKKAAEESEALFVLTHNYTGYPMVRQAREMIANGDIGAVRLVQMEYPQDWL
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHH
TENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELCADLDSFVGGR
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCHHHHHHHHHHHCCCC
QLDDNAHVLMRFKEKGGARAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWY
CCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEE
TPFGEPKRLLTRAGAGASPAAARVSRIPSGHPEGYLEGFANIYTEAARAIYAKRNGGKAD
CCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAVVYPTLDDGMKGMIFVDACVRSSQRNGAWIKI
CEEEEECCCCCCCCEEEEEHHHCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]