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The map label for this gene is 150397986

Identifier: 150397986

GI number: 150397986

Start: 2907028

End: 2908080

Strand: Reverse

Name: 150397986

Synonym: Smed_2788

Alternate gene names: NA

Gene position: 2908080-2907028 (Counterclockwise)

Preceding gene: 150397987

Following gene: 150397985

Centisome position: 76.89

GC content: 61.73

Gene sequence:

>1053_bases
ATGAAGACGATCAAAGGGCCGGGGCTGTTCCTTGCGCAATTCGCCGGCGATGCCGCACCTTTCAATTCCTGGGATTCGAT
CACCAAATGGGCAGCCGATTGCGGCTATAAAGGCGTGCAGGTCCCGAGCTGGGACGGGCGGCTGTTCGATCTGAAGAAGG
CAGCCGAATCGAAAGCCTATTGTGACGAGATCGCCGGCAAGGCGCGCGACAACGGCGTGGAGATCACCGAACTTTCGACC
CACCTCCAGGGCCAGCTCGTCGCGGCTCATCCGGCTTATGACGAGGCATTCGACGGTTTCGCCGTTCCGGAAGTGCGCGG
CAACCCTAGGGCACGGCAGGAATGGGCGGTCGAGCAGGTAAAGCTGGCGCTGACGGCCTCGAAGAATCTTGGTCTCGATG
CAATGGCAAGCTTTTCCGGCGCGCTGGCATGGCCCTTCGTCTATCCGTGGCCGCAGCGTCCGGCGGGCCTGGTGGAAACG
GCCTTCGACGAACTCGCACGGCGGTGGAAGCCGATCCTTGACCATGCAGAGGATTGCGGCGTCGACGTGTGCTACGAGAT
CCATCCGGGCGAGGACCTGTATGACGGCATCACCTATGAGATGTTCCTTGAGCGTACCGGCAATCACGCCCGCGCCTGCA
TGCTCTACGACCCGTCACACTACGTGCTGCAGTGCCTGGACTATCTCGAGAATATCGACATCTACAAGGATCGGATCCGG
ATGTTCCACGTCAAGGACGCGGAGTTCAACCCGACCGGGCGCCAGGGCGTTTATGGCGGTTACCAGAGCTGGGTGAACCG
GGCCGGCCGTTTCCGCTCGCTCGGCGATGGCCAGGTGGATTTCGGCGCGGTCTTTTCCAAGATGACGGCGAATGATTTTA
CCGGCTGGGCGGTGGTCGAGTGGGAATGCTGCCTCAAGCACCCGGAAGACGGCGCGCGCGAGGGGGCCGAGTTCGTGAAG
GCGCATATCATCCGCGTCACCGAAAAGGCCTTTGACGATTTCGCCGACAGCGGCACCGACGAAGCCGCGAACCGGCGGAT
GCTGGGAATTTAG

Upstream 100 bases:

>100_bases
GTATCAGCCGCTGCGGAATTCGCGGGCCGGAAGCACTTGAAGTCAACGGTCGGCCGTAGTGCCGGCATATCGCACACCGC
TCCATCAGGGAGGAAATTCT

Downstream 100 bases:

>100_bases
TCGATCAACTGTCCGCCCCTCACCCTCTTCCGCGCTTACGGGAGAGGGGACTTTCCCCGCCCTTCCGCTGGGGGAGGCAT
CGCCGCGACCTTCTCCCCGG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain Protein Tim Barrel; Iole Protein; AP Endonuclease; Endonuclease IV; Apurinic/Apyrimidinic Endonuclease; Endonuclease; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; IolE-Like Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel Family Protein; Xylose Isomerase/Endonuclease Family Protein; Sugar Phosphate Isomerase/Epimerase IolE; Inosose Dehydratase; IolE Protein; AP Endonuclease Family 2 C Terminus Family; Xlose Isomerase Domain-Containing Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADCGYKGVQVPSWDGRLFDLKKAAESKAYCDEIAGKARDNGVEITELST
HLQGQLVAAHPAYDEAFDGFAVPEVRGNPRARQEWAVEQVKLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVET
AFDELARRWKPILDHAEDCGVDVCYEIHPGEDLYDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLENIDIYKDRIR
MFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMTANDFTGWAVVEWECCLKHPEDGAREGAEFVK
AHIIRVTEKAFDDFADSGTDEAANRRMLGI

Sequences:

>Translated_350_residues
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADCGYKGVQVPSWDGRLFDLKKAAESKAYCDEIAGKARDNGVEITELST
HLQGQLVAAHPAYDEAFDGFAVPEVRGNPRARQEWAVEQVKLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVET
AFDELARRWKPILDHAEDCGVDVCYEIHPGEDLYDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLENIDIYKDRIR
MFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMTANDFTGWAVVEWECCLKHPEDGAREGAEFVK
AHIIRVTEKAFDDFADSGTDEAANRRMLGI
>Mature_350_residues
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADCGYKGVQVPSWDGRLFDLKKAAESKAYCDEIAGKARDNGVEITELST
HLQGQLVAAHPAYDEAFDGFAVPEVRGNPRARQEWAVEQVKLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVET
AFDELARRWKPILDHAEDCGVDVCYEIHPGEDLYDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLENIDIYKDRIR
MFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMTANDFTGWAVVEWECCLKHPEDGAREGAEFVK
AHIIRVTEKAFDDFADSGTDEAANRRMLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39090; Mature: 39090

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADCGYKGVQVPSWDGRLFDLKKAAESKAY
CCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHH
CDEIAGKARDNGVEITELSTHLQGQLVAAHPAYDEAFDGFAVPEVRGNPRARQEWAVEQV
HHHHHCCCCCCCEEEEEHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVETAFDELARRWKPILDHAEDCG
HHEEEECCCCCHHHHHHCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
VDVCYEIHPGEDLYDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLENIDIYKDRIR
CEEEEEECCCCHHHCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHH
MFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMTANDFTGWAVVE
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE
WECCLKHPEDGAREGAEFVKAHIIRVTEKAFDDFADSGTDEAANRRMLGI
EHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADCGYKGVQVPSWDGRLFDLKKAAESKAY
CCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHH
CDEIAGKARDNGVEITELSTHLQGQLVAAHPAYDEAFDGFAVPEVRGNPRARQEWAVEQV
HHHHHCCCCCCCEEEEEHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
KLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVETAFDELARRWKPILDHAEDCG
HHEEEECCCCCHHHHHHCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
VDVCYEIHPGEDLYDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLENIDIYKDRIR
CEEEEEECCCCHHHCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHH
MFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMTANDFTGWAVVE
EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE
WECCLKHPEDGAREGAEFVKAHIIRVTEKAFDDFADSGTDEAANRRMLGI
EHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA