| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397979
Identifier: 150397979
GI number: 150397979
Start: 2899069
End: 2899971
Strand: Direct
Name: 150397979
Synonym: Smed_2781
Alternate gene names: NA
Gene position: 2899069-2899971 (Clockwise)
Preceding gene: 150397978
Following gene: 150397980
Centisome position: 76.66
GC content: 62.9
Gene sequence:
>903_bases ATGACCTTCGCCTTCAATCCGGGCCGCCCTTTTACTGCGGACTTCCGCGCTGTGGGAGGCGAACAGATAGAGCGCGCGAT AGCAATGCTGGAGGATCAGCCCCATGGCCTCCACGAGGCGATCCACGACGCGCGCAAGAGTTTCAAGCGGCTGCGCTCGC TCTATCGGCTCGTAGCCCACGATGCGCCACTCTTCCAGGGCCAGGAAAACGCCCGCATCCGCGACATGGCCCGCAAACTC TCGACATTCCGGGATGCGGCAGCGCTCGTCGAAAATGCCGTTTATCTGCGAGAGCACGCGGCCAGCGAAGAGCAGCAGCT CGCTTTGGACAAGATTTGCTCGATCCTGGCGAGCCGGCGCGACCGGATTGCAGAAAGCGAAGGCGATCTCGACCGAAAGA TCGAGGCAACCATCGTCGATTGCCGAAAGGCGCTTTCCGCACTCGCTCATGTCTCCTTTCAAGATGGCAGGCGGAAGTCC GCCCGCCGCCTTGCCAAGGGCTGGCGGCGGACATTGCGCCGCGCCGGGCGCGCCAGAACGGCCTGTGCGGCAAGCTCCGA TACGATCCTGTTCCACGACTTGCGCAAGAGCACACAGGACTACCGCATGCACCTTGCTCTGCTGCGCGAAGCATGGCCGT CGGCAATGCAGGCGAAGAGAGCGGAGGCCGGCGAGTTGGCCGATGTGCTCGGCCATCTGAATGACATCGCCACGTTGGTC GCCCTCGTCAACGAGCGGCCGGACCTCGCAGGCAACAGTAAGGAACACCTTTTTTCCAGCGTCGCCGCACGGCAGGACGA ACTTAGGCGTGAGGCCCTGCAACGCGCAGAGAAGGTCTTTTTCGACCGGCCGCGGAAGGAGAGCGGAACTCTCGAACTGC TCTGGCTGGAAGCAGGGCGATAG
Upstream 100 bases:
>100_bases ACCTCCCCACCCTGCCGGCCTGGCTTGGGCGTGAGATCACCGGCGATCGCCGCTACTCCAATCAAGCGCTTGCCACCGAG GGGCTCCTGGAAGCGCAGGC
Downstream 100 bases:
>100_bases AACGGTCGCGGCGACCGACGGACTTGACCCGCGAATCGCCGCAATTGCACTTGGCGCCCGAAAGCTGTATTTGCGTGCCG CATGACCGACATGCTCACGA
Product: CHAD domain-containing protein
Products: NA
Alternate protein names: Adenylate Cyclase Protein; CHAD Domain Containing Protein
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTFAFNPGRPFTADFRAVGGEQIERAIAMLEDQPHGLHEAIHDARKSFKRLRSLYRLVAHDAPLFQGQENARIRDMARKL STFRDAAALVENAVYLREHAASEEQQLALDKICSILASRRDRIAESEGDLDRKIEATIVDCRKALSALAHVSFQDGRRKS ARRLAKGWRRTLRRAGRARTACAASSDTILFHDLRKSTQDYRMHLALLREAWPSAMQAKRAEAGELADVLGHLNDIATLV ALVNERPDLAGNSKEHLFSSVAARQDELRREALQRAEKVFFDRPRKESGTLELLWLEAGR
Sequences:
>Translated_300_residues MTFAFNPGRPFTADFRAVGGEQIERAIAMLEDQPHGLHEAIHDARKSFKRLRSLYRLVAHDAPLFQGQENARIRDMARKL STFRDAAALVENAVYLREHAASEEQQLALDKICSILASRRDRIAESEGDLDRKIEATIVDCRKALSALAHVSFQDGRRKS ARRLAKGWRRTLRRAGRARTACAASSDTILFHDLRKSTQDYRMHLALLREAWPSAMQAKRAEAGELADVLGHLNDIATLV ALVNERPDLAGNSKEHLFSSVAARQDELRREALQRAEKVFFDRPRKESGTLELLWLEAGR >Mature_299_residues TFAFNPGRPFTADFRAVGGEQIERAIAMLEDQPHGLHEAIHDARKSFKRLRSLYRLVAHDAPLFQGQENARIRDMARKLS TFRDAAALVENAVYLREHAASEEQQLALDKICSILASRRDRIAESEGDLDRKIEATIVDCRKALSALAHVSFQDGRRKSA RRLAKGWRRTLRRAGRARTACAASSDTILFHDLRKSTQDYRMHLALLREAWPSAMQAKRAEAGELADVLGHLNDIATLVA LVNERPDLAGNSKEHLFSSVAARQDELRREALQRAEKVFFDRPRKESGTLELLWLEAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33915; Mature: 33784
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAFNPGRPFTADFRAVGGEQIERAIAMLEDQPHGLHEAIHDARKSFKRLRSLYRLVAH CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DAPLFQGQENARIRDMARKLSTFRDAAALVENAVYLREHAASEEQQLALDKICSILASRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DRIAESEGDLDRKIEATIVDCRKALSALAHVSFQDGRRKSARRLAKGWRRTLRRAGRART HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ACAASSDTILFHDLRKSTQDYRMHLALLREAWPSAMQAKRAEAGELADVLGHLNDIATLV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALVNERPDLAGNSKEHLFSSVAARQDELRREALQRAEKVFFDRPRKESGTLELLWLEAGR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TFAFNPGRPFTADFRAVGGEQIERAIAMLEDQPHGLHEAIHDARKSFKRLRSLYRLVAH CCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DAPLFQGQENARIRDMARKLSTFRDAAALVENAVYLREHAASEEQQLALDKICSILASRR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH DRIAESEGDLDRKIEATIVDCRKALSALAHVSFQDGRRKSARRLAKGWRRTLRRAGRART HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ACAASSDTILFHDLRKSTQDYRMHLALLREAWPSAMQAKRAEAGELADVLGHLNDIATLV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALVNERPDLAGNSKEHLFSSVAARQDELRREALQRAEKVFFDRPRKESGTLELLWLEAGR HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA