Click here to switch to the map view.

The map label for this gene is yceA [C]

Identifier: 150397980

GI number: 150397980

Start: 2900053

End: 2901000

Strand: Direct

Name: yceA [C]

Synonym: Smed_2782

Alternate gene names: 150397980

Gene position: 2900053-2901000 (Clockwise)

Preceding gene: 150397979

Following gene: 150397988

Centisome position: 76.68

GC content: 61.08

Gene sequence:

>948_bases
ATGACCGACATGCTCACGACATCGCGCCGTCCGGAGACGCCGGGCCAGTTTCTGGTGGCCGCGCTCTACCATTTCATATC
CTTCCCGCGCTTCGCCGATTTCCGCGAGCCGCTACAGGCGATCTGCGACGCCAATGGGGTGAAGGGAACGCTGCTTCTTG
CGCATGAGGGTATCAACGGGACAATCGCCGGCAGCGAAGAAGGTATTGCGACGGTCCTTGCATTTCTTCGCGCGCAGCCT
GAATTTGCCGATCTCGTGCACAAGGAGAGCCGGGCCTCGGCCATGCCGTTCCTGCGCATGAAGGTGCGCCTGAAGAAGGA
GATCGTCACCATGGGCGTCGAGAACATCGACCCCAAAAAGGTGGTCGGCACCTATGTGGAGCCGAAGGACTGGAACGCGC
TGATCTCCGATCCGGAAACGCTGGTCATCGACACGCGCAACGACTACGAAACGGCCATTGGCGTGTTCCAGGGCGCCGTC
GACCCGAAGACAAAGACCTTCCGCGAATTTCCCGAATGGGTGCGCAACAATAGCGGCCTGCACAACAAGCCCAAGATCGC
CATGTACTGCACCGGCGGCATCCGATGCGAGAAGGCCACCGCCTTCATGAAGGAACAAGGCTTCGAGGAGGTCTATCACC
TCAAGGGCGGCATCCTCAAATATCTGGAGGAAATACCGCCGGAAGAGAGCCTGTGGGAAGGTGCTTGCTTCGTCTTCGAT
GAACGCGTGTCCGTCACCCACGGGCTGCAGGAGGGCGAGCACACGCTCTGCCATGCCTGCCGCCAGCCGCTGACGACCGA
GGATCTCCGCTCGCCCCTTCACGAGGAAGGCGTCTCCTGTGTCAACTGCCACGACACCCGCACCGAAGAGGATCGGGAGC
GTTATCGTCAGCGACAGAGGCAGATCGTGCTTGCGAAGAAGCGCGGGGCGCGGCATCTCGGAAGCTAG

Upstream 100 bases:

>100_bases
GCTGGAAGCAGGGCGATAGAACGGTCGCGGCGACCGACGGACTTGACCCGCGAATCGCCGCAATTGCACTTGGCGCCCGA
AAGCTGTATTTGCGTGCCGC

Downstream 100 bases:

>100_bases
TCTGACGGACTCACCCGGTGGATGTCCCTGATCCGCCTGCCGGGACCTTTTCCCCGCAGGCGGGGCGAAGGGAAAAGCTT
CACCCGCTCTGCCCCTCTCC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTDMLTTSRRPETPGQFLVAALYHFISFPRFADFREPLQAICDANGVKGTLLLAHEGINGTIAGSEEGIATVLAFLRAQP
EFADLVHKESRASAMPFLRMKVRLKKEIVTMGVENIDPKKVVGTYVEPKDWNALISDPETLVIDTRNDYETAIGVFQGAV
DPKTKTFREFPEWVRNNSGLHNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFD
ERVSVTHGLQEGEHTLCHACRQPLTTEDLRSPLHEEGVSCVNCHDTRTEEDRERYRQRQRQIVLAKKRGARHLGS

Sequences:

>Translated_315_residues
MTDMLTTSRRPETPGQFLVAALYHFISFPRFADFREPLQAICDANGVKGTLLLAHEGINGTIAGSEEGIATVLAFLRAQP
EFADLVHKESRASAMPFLRMKVRLKKEIVTMGVENIDPKKVVGTYVEPKDWNALISDPETLVIDTRNDYETAIGVFQGAV
DPKTKTFREFPEWVRNNSGLHNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFD
ERVSVTHGLQEGEHTLCHACRQPLTTEDLRSPLHEEGVSCVNCHDTRTEEDRERYRQRQRQIVLAKKRGARHLGS
>Mature_314_residues
TDMLTTSRRPETPGQFLVAALYHFISFPRFADFREPLQAICDANGVKGTLLLAHEGINGTIAGSEEGIATVLAFLRAQPE
FADLVHKESRASAMPFLRMKVRLKKEIVTMGVENIDPKKVVGTYVEPKDWNALISDPETLVIDTRNDYETAIGVFQGAVD
PKTKTFREFPEWVRNNSGLHNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFDE
RVSVTHGLQEGEHTLCHACRQPLTTEDLRSPLHEEGVSCVNCHDTRTEEDRERYRQRQRQIVLAKKRGARHLGS

Specific function: Unknown. [C]

COG id: COG1054

COG function: function code R; Predicted sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain

Homologues:

Organism=Homo sapiens, GI111038120, Length=304, Percent_Identity=32.5657894736842, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI1787294, Length=255, Percent_Identity=37.6470588235294, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2782_SINMW (A6UD82)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001328447.1
- ProteinModelPortal:   A6UD82
- SMR:   A6UD82
- STRING:   A6UD82
- GeneID:   5323652
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_2782
- eggNOG:   COG1054
- HOGENOM:   HBG366219
- OMA:   ARNDYEY
- ProtClustDB:   CLSK800767
- BioCyc:   SMED366394:SMED_2782-MONOMER
- HAMAP:   MF_00469
- InterPro:   IPR001763
- InterPro:   IPR020936
- Gene3D:   G3DSA:3.40.250.10
- SMART:   SM00450

Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like

EC number: NA

Molecular weight: Translated: 35621; Mature: 35490

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS50206 RHODANESE_3

Important sites: ACT_SITE 190-190

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMLTTSRRPETPGQFLVAALYHFISFPRFADFREPLQAICDANGVKGTLLLAHEGING
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
TIAGSEEGIATVLAFLRAQPEFADLVHKESRASAMPFLRMKVRLKKEIVTMGVENIDPKK
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
VVGTYVEPKDWNALISDPETLVIDTRNDYETAIGVFQGAVDPKTKTFREFPEWVRNNSGL
HHCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
HNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFD
CCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEE
ERVSVTHGLQEGEHTLCHACRQPLTTEDLRSPLHEEGVSCVNCHDTRTEEDRERYRQRQR
CHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCHHHCCCCEEECCCCCCHHHHHHHHHHHH
QIVLAKKRGARHLGS
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDMLTTSRRPETPGQFLVAALYHFISFPRFADFREPLQAICDANGVKGTLLLAHEGING
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCC
TIAGSEEGIATVLAFLRAQPEFADLVHKESRASAMPFLRMKVRLKKEIVTMGVENIDPKK
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHH
VVGTYVEPKDWNALISDPETLVIDTRNDYETAIGVFQGAVDPKTKTFREFPEWVRNNSGL
HHCCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
HNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFD
CCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEEE
ERVSVTHGLQEGEHTLCHACRQPLTTEDLRSPLHEEGVSCVNCHDTRTEEDRERYRQRQR
CHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCHHHCCCCEEECCCCCCHHHHHHHHHHHH
QIVLAKKRGARHLGS
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA