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The map label for this gene is 150397966

Identifier: 150397966

GI number: 150397966

Start: 2888271

End: 2889260

Strand: Direct

Name: 150397966

Synonym: Smed_2768

Alternate gene names: NA

Gene position: 2888271-2889260 (Clockwise)

Preceding gene: 150397965

Following gene: 150397968

Centisome position: 76.37

GC content: 65.96

Gene sequence:

>990_bases
ATGCCGACCGTCGCTCCGCTCGATCTCGAAGGCCACGTCGTCGGCGTCGCCTTCCTCAAGGATGTTCCCTTCTTCGCCGG
GGCTGCCGGCGCGGTCCACCGGCTCGATCACGGCCACAAAACGACCGAAGCACACGACGGGCTGCTGTCATTCGTCGTAG
ACGAGGCGAACGACACGCTGCTGACCGGCGGCGAAGACGGCAAGGTGATGCGCATTTCGGCACACGGCACAGCGAGCCTC
GTTGCCGATACGGGCCGCAAATGGATCGCGCAGGTTGCTGCCGGACCGCAAGGTGCTGTCGCTTACGCTTATGGAAAGAC
GACGCATGTCCGCCTTTTCGACGGCACGACCCGGGAGTTTCCGGAGCAGCGCACCGTCGAGGGGCTCGCCTTCGCACCCA
AGGGCCTGAGGATCGCTGCCGCGCGCTACAATGGCGTTTCGCTGCATTGGGTTGCGATGTCAGGCCAGCCGGTCGATCTC
GAATGGAAGGGCGCCCATACCGGCGTCACCTTCTCACCCGACGGGCGCTTCGTCGTCACGGCCATGCAGGAAAATGCGCT
GCATGGGTGGAAACTCGATGCAAAGCCGGGCGCCGAGGCGCGACACATGCGCATGACCGGCTACCCCGCAAAGGTGAAGT
CGCTCTCCTGGTCGGCGAAGGGCAAGTGGCTCGCTTCGTCCGGCGCGCCGGCGGCGATCGTCTGGCCATTTCAGGGTAAG
GACGGGCCGATGGGCAAGGCGCCGCTCGAACTCGGCACCCGCGCCAACATCATGGTCACGACGGTCGTCTGCCACCCGGC
AGAGGATATCGTCGCCATCGGCTATGAGGACGGCATGATCCTCGCCGCCCGCCTTGCCGACAGCAAGGAAGTGCTGCTGC
GCCGCCCCGGCAAGGGCGCAATCACCGCCATGGCCTGGAGCAAGAACGGCCGCCAACTGGCGTTCGGCTCGGCCGCCGGG
GATTGCGGCGTGGTGGATATTGCAGGGTAG

Upstream 100 bases:

>100_bases
GAGCGCACCTTCAGGGCGTGTGAAGTCCAGGCATGATCTTGAAAGATGGTGCCCGGCTTCGGAATAAGATCATGATGAAA
CAAGAGAGCCCGCCAAACTG

Downstream 100 bases:

>100_bases
CAGGCATTCGTGCCGTTCCCCTCGCCTGCGAGGAGAACGGCTTCGAAGTAAAAACGCCGCGAGTCACCTTCGCCCTTTGT
TCACCACTCCAGTTCCAGAT

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: WD-40 Repeat Protein; WD-40 Repeat-Containing G-Protein; WD Repeat-Containing Protein; WD-Repeat Family Protein; G- Repeat Protein; Beta WD-40 Repeat-Containing G-Protein; WD40 Repeat Subgroup; Vegetatible Incompatibility; Wd-40 Repeat Protein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPTVAPLDLEGHVVGVAFLKDVPFFAGAAGAVHRLDHGHKTTEAHDGLLSFVVDEANDTLLTGGEDGKVMRISAHGTASL
VADTGRKWIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREFPEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMSGQPVDL
EWKGAHTGVTFSPDGRFVVTAMQENALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGK
DGPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDGMILAARLADSKEVLLRRPGKGAITAMAWSKNGRQLAFGSAAG
DCGVVDIAG

Sequences:

>Translated_329_residues
MPTVAPLDLEGHVVGVAFLKDVPFFAGAAGAVHRLDHGHKTTEAHDGLLSFVVDEANDTLLTGGEDGKVMRISAHGTASL
VADTGRKWIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREFPEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMSGQPVDL
EWKGAHTGVTFSPDGRFVVTAMQENALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGK
DGPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDGMILAARLADSKEVLLRRPGKGAITAMAWSKNGRQLAFGSAAG
DCGVVDIAG
>Mature_328_residues
PTVAPLDLEGHVVGVAFLKDVPFFAGAAGAVHRLDHGHKTTEAHDGLLSFVVDEANDTLLTGGEDGKVMRISAHGTASLV
ADTGRKWIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREFPEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMSGQPVDLE
WKGAHTGVTFSPDGRFVVTAMQENALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGKD
GPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDGMILAARLADSKEVLLRRPGKGAITAMAWSKNGRQLAFGSAAGD
CGVVDIAG

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34655; Mature: 34524

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVAPLDLEGHVVGVAFLKDVPFFAGAAGAVHRLDHGHKTTEAHDGLLSFVVDEANDTL
CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEEEECCCCEE
LTGGEDGKVMRISAHGTASLVADTGRKWIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREF
EECCCCCCEEEEECCCCEEEEHHCCHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCHHC
PEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMSGQPVDLEWKGAHTGVTFSPDGRFVVT
CCHHCCCCEEECCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCCCCEEECCCCCEEEE
AMQENALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGK
EECCCCCCCEEECCCCCCCCEEEEECCCCCHHEEEEECCCCCEEECCCCCEEEEEEECCC
DGPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDGMILAARLADSKEVLLRRPGKGA
CCCCCCCCHHCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCHHEEECCCCCE
ITAMAWSKNGRQLAFGSAAGDCGVVDIAG
EEEEEECCCCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure 
PTVAPLDLEGHVVGVAFLKDVPFFAGAAGAVHRLDHGHKTTEAHDGLLSFVVDEANDTL
CCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEEEECCCCEE
LTGGEDGKVMRISAHGTASLVADTGRKWIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREF
EECCCCCCEEEEECCCCEEEEHHCCHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCHHC
PEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMSGQPVDLEWKGAHTGVTFSPDGRFVVT
CCHHCCCCEEECCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCCCCEEECCCCCEEEE
AMQENALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGK
EECCCCCCCEEECCCCCCCCEEEEECCCCCHHEEEEECCCCCEEECCCCCEEEEEEECCC
DGPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDGMILAARLADSKEVLLRRPGKGA
CCCCCCCCHHCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCHHEEECCCCCE
ITAMAWSKNGRQLAFGSAAGDCGVVDIAG
EEEEEECCCCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA