| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397946
Identifier: 150397946
GI number: 150397946
Start: 2866281
End: 2866952
Strand: Direct
Name: 150397946
Synonym: Smed_2748
Alternate gene names: NA
Gene position: 2866281-2866952 (Clockwise)
Preceding gene: 150397944
Following gene: 150397951
Centisome position: 75.79
GC content: 53.27
Gene sequence:
>672_bases ATGAAAGCTTGGAGCAAATGGTTAACTCGGCTCTTCTGCCTGATTATCCTGGTCGACGTCGTTGGCATTGCTTCAAGCTA CGGACAGCATCGACTTCTTGATCAATTCGAAACTGCGCTTGCCGTTAATGACACAATGCTGGCGGCAGCCGAGAGCAATG ACCTCCGTCAACAAGTTGTTGCCGGGCTGCAAGTCTTCTTGTGGATCTGCGCAATGATCGCCTCGCTCACATGGATCAGG AGCGCGAACCAGAGCGCTCGCGCTCGGGGGGCAGTCGGGATGCGATTCACGCCGAATTGGTCTATCGGCTGGTATTTCAT TCCGATCGCAAGCCTCTGGATGCCTTATCAGGCCATGAAGGAAATATGGCAGGCGGGACGCGGAGGAGATGCCTGGAAAG AGGACCAGGTACCCGACTTTTTTCCGATTTGGTGGTTCGTGTGGCTCTTCAACATATTCGTGAGCAAGGCCGTGCTCAGG AATACTCTGAACACCGAGACGATAGCTGAACTCAAGCACGCCACCGTCATTGCGATAGCGTCTGATGCAGCGAGTATCGT ACTATACCTGATGTTTTTATCCGTCGTTCGAGAGGTGTGCCGCCGACACACTTCCGACCCTTCAAAAGAAAGCGATTATA ACCGCCCGATGCAAGAAAGCCTGCCGGGTTAA
Upstream 100 bases:
>100_bases AGAGGCCGACCGCCAATCGAGCAACGACTGGCCGGAACAGATCGTGTTGCCCTGAATAAGTTTTCGTGCAACATTGGGTA AATACAACCTAGAGGGGAAC
Downstream 100 bases:
>100_bases GACCTGTTCCGAGGGGCGGCAGGTTGCCTTGGCTAGGCAGCTTCGCCCAGGCCGGGCCGACGGGCGGCGGCTCGTCTCGT TCGCCCCCGCCTCCTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKAWSKWLTRLFCLIILVDVVGIASSYGQHRLLDQFETALAVNDTMLAAAESNDLRQQVVAGLQVFLWICAMIASLTWIR SANQSARARGAVGMRFTPNWSIGWYFIPIASLWMPYQAMKEIWQAGRGGDAWKEDQVPDFFPIWWFVWLFNIFVSKAVLR NTLNTETIAELKHATVIAIASDAASIVLYLMFLSVVREVCRRHTSDPSKESDYNRPMQESLPG
Sequences:
>Translated_223_residues MKAWSKWLTRLFCLIILVDVVGIASSYGQHRLLDQFETALAVNDTMLAAAESNDLRQQVVAGLQVFLWICAMIASLTWIR SANQSARARGAVGMRFTPNWSIGWYFIPIASLWMPYQAMKEIWQAGRGGDAWKEDQVPDFFPIWWFVWLFNIFVSKAVLR NTLNTETIAELKHATVIAIASDAASIVLYLMFLSVVREVCRRHTSDPSKESDYNRPMQESLPG >Mature_223_residues MKAWSKWLTRLFCLIILVDVVGIASSYGQHRLLDQFETALAVNDTMLAAAESNDLRQQVVAGLQVFLWICAMIASLTWIR SANQSARARGAVGMRFTPNWSIGWYFIPIASLWMPYQAMKEIWQAGRGGDAWKEDQVPDFFPIWWFVWLFNIFVSKAVLR NTLNTETIAELKHATVIAIASDAASIVLYLMFLSVVREVCRRHTSDPSKESDYNRPMQESLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25381; Mature: 25381
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAWSKWLTRLFCLIILVDVVGIASSYGQHRLLDQFETALAVNDTMLAAAESNDLRQQVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AGLQVFLWICAMIASLTWIRSANQSARARGAVGMRFTPNWSIGWYFIPIASLWMPYQAMK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCHHHHH EIWQAGRGGDAWKEDQVPDFFPIWWFVWLFNIFVSKAVLRNTLNTETIAELKHATVIAIA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEH SDAASIVLYLMFLSVVREVCRRHTSDPSKESDYNRPMQESLPG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure MKAWSKWLTRLFCLIILVDVVGIASSYGQHRLLDQFETALAVNDTMLAAAESNDLRQQVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH AGLQVFLWICAMIASLTWIRSANQSARARGAVGMRFTPNWSIGWYFIPIASLWMPYQAMK HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCHHHHH EIWQAGRGGDAWKEDQVPDFFPIWWFVWLFNIFVSKAVLRNTLNTETIAELKHATVIAIA HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEH SDAASIVLYLMFLSVVREVCRRHTSDPSKESDYNRPMQESLPG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA