| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397944
Identifier: 150397944
GI number: 150397944
Start: 2863842
End: 2864909
Strand: Direct
Name: 150397944
Synonym: Smed_2746
Alternate gene names: NA
Gene position: 2863842-2864909 (Clockwise)
Preceding gene: 150397943
Following gene: 150397946
Centisome position: 75.72
GC content: 64.89
Gene sequence:
>1068_bases ATGTCTGACGCGACGCCAGCCGGGACGCGCGTTCGCGATGCTTTCCGAGATCAGGCAAGATCCTGCGACGAACTGGGATC GCCATTTACCGCCCGGCTCTGCCGTCTCGTCGCCGATCGACTGGCGACAGGGTCGAAAGTTGGCACGCATGTCCTCGGCT GGCATGGCGACCCGACCTCAAAAGGCGATTCGGTGCCGCTACGCCTTGCCGGTGCCTTGCATGCGCTGGTCCTCTCCGGC CGCGACGAGGAGCTCGAGGCAAGCTATCCACCGAACCGATACGACGACGAAGCCCTCTGGCAGGCGATCACTCGGGCAAT GGAGCAGCAGGCCGGTTTCATCCTCGACCGCCTCATCTCGGCGCCGCAGACCAATGAGGTGCGTCGCTCCGCCGCCCTTC TTCCCGGTTTTCTCACTGTGGCGCAGCTTTTCGGAAAACCACTTCTGCTTTCGGAGGTCGGCGCCAGTGCGGGCTTGAAC CTGCACTGGGACCGCTACCGCTACGCTCTGGCGGGCAACCATTGGGGCAATGAAGCCAGTGCTGTGGCCATCGCACCTGA ATGGTCGGGAGCAAGGCCGCCCCTGCGGAATGTCGAAATCATCGACCGCGCCGGGTGCGACCTCAATCCCATCGATCCGT CCGATAGCGAGGATCGGCTTCGGCTTCTCTCCTATGTCTGGGCCGACCAGCAGGACCGGATCGACCGCACGAGGCAAGCA CTGGAGCTCGCCGCCTTTCACGGCAGCCTGGTCGAGCGGGCGGACGCGATCGACTGGCTGAGGATGCGCTTGTCGATCGC CCATTCGGGCGCTGCCCACGTTGTCTATCACTCGATCGCCTGGCAATACCTGCCGCAAATCGCCCGCAACGCAGGTGAGG CTCTGATTTCCGCCGCGGGGGCGGCTGCGACATCTGAGGCTCCGCTTGCCCGACTCCAGATGGAAGCCGACGGTCAGGCG CCCGGCGCGGCACTTTCACTGCAGATCTGGCCGAGCGGCGACAAGCATCTCGTCGGCCGTGCCGACTTTCACGGACGCTG GGTCGCCTGGCAGGGATGGCCGACATGA
Upstream 100 bases:
>100_bases ACCTACGATGTTACCGTCGAAATCGAAGGCGAAAGGAAACCGGCGCTGACCGCGACCTGGCAGACGATCATCCAGTTCGA TCCGAAAGACCGGCCAGCAG
Downstream 100 bases:
>100_bases TTTCCGTGACAATGGTGAAGTGATCAGAACTCTATCACGTGTCTGATCACGCGGCCCTGATCCAGAAGGTCGAAGGCTTC GTTGATCTCCTCAAGCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSDATPAGTRVRDAFRDQARSCDELGSPFTARLCRLVADRLATGSKVGTHVLGWHGDPTSKGDSVPLRLAGALHALVLSG RDEELEASYPPNRYDDEALWQAITRAMEQQAGFILDRLISAPQTNEVRRSAALLPGFLTVAQLFGKPLLLSEVGASAGLN LHWDRYRYALAGNHWGNEASAVAIAPEWSGARPPLRNVEIIDRAGCDLNPIDPSDSEDRLRLLSYVWADQQDRIDRTRQA LELAAFHGSLVERADAIDWLRMRLSIAHSGAAHVVYHSIAWQYLPQIARNAGEALISAAGAAATSEAPLARLQMEADGQA PGAALSLQIWPSGDKHLVGRADFHGRWVAWQGWPT
Sequences:
>Translated_355_residues MSDATPAGTRVRDAFRDQARSCDELGSPFTARLCRLVADRLATGSKVGTHVLGWHGDPTSKGDSVPLRLAGALHALVLSG RDEELEASYPPNRYDDEALWQAITRAMEQQAGFILDRLISAPQTNEVRRSAALLPGFLTVAQLFGKPLLLSEVGASAGLN LHWDRYRYALAGNHWGNEASAVAIAPEWSGARPPLRNVEIIDRAGCDLNPIDPSDSEDRLRLLSYVWADQQDRIDRTRQA LELAAFHGSLVERADAIDWLRMRLSIAHSGAAHVVYHSIAWQYLPQIARNAGEALISAAGAAATSEAPLARLQMEADGQA PGAALSLQIWPSGDKHLVGRADFHGRWVAWQGWPT >Mature_354_residues SDATPAGTRVRDAFRDQARSCDELGSPFTARLCRLVADRLATGSKVGTHVLGWHGDPTSKGDSVPLRLAGALHALVLSGR DEELEASYPPNRYDDEALWQAITRAMEQQAGFILDRLISAPQTNEVRRSAALLPGFLTVAQLFGKPLLLSEVGASAGLNL HWDRYRYALAGNHWGNEASAVAIAPEWSGARPPLRNVEIIDRAGCDLNPIDPSDSEDRLRLLSYVWADQQDRIDRTRQAL ELAAFHGSLVERADAIDWLRMRLSIAHSGAAHVVYHSIAWQYLPQIARNAGEALISAAGAAATSEAPLARLQMEADGQAP GAALSLQIWPSGDKHLVGRADFHGRWVAWQGWPT
Specific function: Unknown
COG id: COG4427
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38681; Mature: 38550
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDATPAGTRVRDAFRDQARSCDELGSPFTARLCRLVADRLATGSKVGTHVLGWHGDPTS CCCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC KGDSVPLRLAGALHALVLSGRDEELEASYPPNRYDDEALWQAITRAMEQQAGFILDRLIS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC APQTNEVRRSAALLPGFLTVAQLFGKPLLLSEVGASAGLNLHWDRYRYALAGNHWGNEAS CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHEEEEEECCCCCCCCC AVAIAPEWSGARPPLRNVEIIDRAGCDLNPIDPSDSEDRLRLLSYVWADQQDRIDRTRQA EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LELAAFHGSLVERADAIDWLRMRLSIAHSGAAHVVYHSIAWQYLPQIARNAGEALISAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAATSEAPLARLQMEADGQAPGAALSLQIWPSGDKHLVGRADFHGRWVAWQGWPT CCCCCCCCHHHEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCC >Mature Secondary Structure SDATPAGTRVRDAFRDQARSCDELGSPFTARLCRLVADRLATGSKVGTHVLGWHGDPTS CCCCCCCHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC KGDSVPLRLAGALHALVLSGRDEELEASYPPNRYDDEALWQAITRAMEQQAGFILDRLIS CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC APQTNEVRRSAALLPGFLTVAQLFGKPLLLSEVGASAGLNLHWDRYRYALAGNHWGNEAS CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHEEEEEECCCCCCCCC AVAIAPEWSGARPPLRNVEIIDRAGCDLNPIDPSDSEDRLRLLSYVWADQQDRIDRTRQA EEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LELAAFHGSLVERADAIDWLRMRLSIAHSGAAHVVYHSIAWQYLPQIARNAGEALISAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAATSEAPLARLQMEADGQAPGAALSLQIWPSGDKHLVGRADFHGRWVAWQGWPT CCCCCCCCHHHEEECCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA