| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is pgm [H]
Identifier: 150397941
GI number: 150397941
Start: 2859579
End: 2861207
Strand: Direct
Name: pgm [H]
Synonym: Smed_2743
Alternate gene names: 150397941
Gene position: 2859579-2861207 (Clockwise)
Preceding gene: 150397940
Following gene: 150397942
Centisome position: 75.61
GC content: 62.12
Gene sequence:
>1629_bases ATGACAAGAACCGTCTCCACCAATCCTTATAGCGACCAGAAGCCGGGCACCTCTGGCCTGCGCAAGAAAGTTCCGGTTTT CCAGCAGAAAAATTATGCCGAGAACTTCATCCAGTCGATCTTCGACTCGCTTGATGGCTTCGAAGGCCAGACGCTGGTGA TCGGCGGCGATGGCCGCTACTACAACCGCGAGGTCATTCAGAAGGCTATCAAGATGGCGGCCGCGAACGGCTTTGGCCGT GTGCTCGTCGGCCGCGGCGGCATTCTCTCGACTCCGGCCGCGTCCCATGTCATCCGCAAGTACAAGGCGTTCGGCGGCAT CGTGCTTTCGGCGAGCCACAATCCCGGCGGCCCCACCGAAGACTTCGGCATCAAGTACAATGTCGGCAATGGCGGCCCGG CCCCCGAAAAGGTCACCGACGCGATCTTTGCCCGCAGCAAGACGATCGACAGCTACAGGATCGTCGACGCGCCGGACGTG AACCTCGACGCGGAAGGCAGCCATCAGGTCGACGACATGACGGTGACCGTCATCGATCCGGTCGCCGATTATGCCGAGTT GATGGAAAGCCTGTTCGACTTCGATGCGATCCGCAAACTGATCGCGGGCGGCTTCCGCGTCGTCTTCGACGCCATGAGCG CAGTCACCGGGCCCTATGCCAAGGAGATCATCGAGAAGCGGCTCGGCGCACCCAAGGGCTCGGTCATGAATTTCATACCG CTGCCCGACTTCGGCGGACATCATCCGGATCCGAATCTCGTCCACGCGCGCGCTCTCTACGAGACGATGATGGCGCCTGA TGCGCCCGATTTCGGCGCCGCGTCGGATGGCGACGGCGACCGGAATTTGATCATCGGCAAGAGCATCTTTGTCACTCCGT CTGATAGCCTTGCAATGCTCGCAGCCAATGCGCACCTCGCCCCGGGCTATGCCAAAGGACTTGCAGGGATAGCACGCTCC ATGCCGACGAGCGGCGCGGCTGACCGTGTGGCCGAGAAGCTCGGTATCGGCATCTACGAGACGCCGACCGGCTGGAAGTT CTTCGGCAATCTGCTCGACGAGGGATTGGCGACGATCTGCGGGGAGGAAAGCGCCGGCACCGGATCGAACCACGTTCGCG AAAAAGACGGCCTCTGGGCCGTGCTGCTCTGGCTCAACATCCTTGCGGCGCGCAAGGAAAGCGCGCTCGAGATCGCCCGC AAGCACTGGGCGACCTACGGCCGGAACTACTATTCCCGCCACGACTACGAAGAGGTCGACTCCGATGCGGCGAACAGTCT GATCACTGCGCTTCGCGACAAGCTGGCCGCGCTGCCCGGCACGAGCTTCGGCGCGCTCACGGTCGATACGGCCGACGATT TTTCCTACCATGATCCAGTCGACAAGTCGGTCAGCAAAAACCAGGGCATCCGCATCCTTTTCAAGGGGGGATCGCGCGTC GTCTATCGCCTGTCCGGCACGGGGACGTCGGGAGCGACACTGCGCGTCTATATCGAGCGCTACGAACCGGATCCGGCGCG ACATGATCTCGACACGCAGGAAGCGCTCGCCGATCTGATCGCCGTTGCCGACGAGATCGCCGAGATCAAGGCACGCACCG GCCGCGACCAACCGAGCGTCATCACCTGA
Upstream 100 bases:
>100_bases GCCTGCAGACCCAGGGCATGAAGTCCGACGTTTCCTGGGCAAAAAGCGCGGAACGCTACGTCTCGCTTTACTCCGCTCTT CTCGCGAAAGGCTAAGACAA
Downstream 100 bases:
>100_bases GGTGTTGTATCAACGCCGCCCTCTGTGCGCCCTTTCCCCCTCCGCCCTGCCGGGCAGAGGGGGATCAACACCGGCACTGA CTTGAGCTGCAATATCATGA
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTRTVSTNPYSDQKPGTSGLRKKVPVFQQKNYAENFIQSIFDSLDGFEGQTLVIGGDGRYYNREVIQKAIKMAAANGFGR VLVGRGGILSTPAASHVIRKYKAFGGIVLSASHNPGGPTEDFGIKYNVGNGGPAPEKVTDAIFARSKTIDSYRIVDAPDV NLDAEGSHQVDDMTVTVIDPVADYAELMESLFDFDAIRKLIAGGFRVVFDAMSAVTGPYAKEIIEKRLGAPKGSVMNFIP LPDFGGHHPDPNLVHARALYETMMAPDAPDFGAASDGDGDRNLIIGKSIFVTPSDSLAMLAANAHLAPGYAKGLAGIARS MPTSGAADRVAEKLGIGIYETPTGWKFFGNLLDEGLATICGEESAGTGSNHVREKDGLWAVLLWLNILAARKESALEIAR KHWATYGRNYYSRHDYEEVDSDAANSLITALRDKLAALPGTSFGALTVDTADDFSYHDPVDKSVSKNQGIRILFKGGSRV VYRLSGTGTSGATLRVYIERYEPDPARHDLDTQEALADLIAVADEIAEIKARTGRDQPSVIT
Sequences:
>Translated_542_residues MTRTVSTNPYSDQKPGTSGLRKKVPVFQQKNYAENFIQSIFDSLDGFEGQTLVIGGDGRYYNREVIQKAIKMAAANGFGR VLVGRGGILSTPAASHVIRKYKAFGGIVLSASHNPGGPTEDFGIKYNVGNGGPAPEKVTDAIFARSKTIDSYRIVDAPDV NLDAEGSHQVDDMTVTVIDPVADYAELMESLFDFDAIRKLIAGGFRVVFDAMSAVTGPYAKEIIEKRLGAPKGSVMNFIP LPDFGGHHPDPNLVHARALYETMMAPDAPDFGAASDGDGDRNLIIGKSIFVTPSDSLAMLAANAHLAPGYAKGLAGIARS MPTSGAADRVAEKLGIGIYETPTGWKFFGNLLDEGLATICGEESAGTGSNHVREKDGLWAVLLWLNILAARKESALEIAR KHWATYGRNYYSRHDYEEVDSDAANSLITALRDKLAALPGTSFGALTVDTADDFSYHDPVDKSVSKNQGIRILFKGGSRV VYRLSGTGTSGATLRVYIERYEPDPARHDLDTQEALADLIAVADEIAEIKARTGRDQPSVIT >Mature_541_residues TRTVSTNPYSDQKPGTSGLRKKVPVFQQKNYAENFIQSIFDSLDGFEGQTLVIGGDGRYYNREVIQKAIKMAAANGFGRV LVGRGGILSTPAASHVIRKYKAFGGIVLSASHNPGGPTEDFGIKYNVGNGGPAPEKVTDAIFARSKTIDSYRIVDAPDVN LDAEGSHQVDDMTVTVIDPVADYAELMESLFDFDAIRKLIAGGFRVVFDAMSAVTGPYAKEIIEKRLGAPKGSVMNFIPL PDFGGHHPDPNLVHARALYETMMAPDAPDFGAASDGDGDRNLIIGKSIFVTPSDSLAMLAANAHLAPGYAKGLAGIARSM PTSGAADRVAEKLGIGIYETPTGWKFFGNLLDEGLATICGEESAGTGSNHVREKDGLWAVLLWLNILAARKESALEIARK HWATYGRNYYSRHDYEEVDSDAANSLITALRDKLAALPGTSFGALTVDTADDFSYHDPVDKSVSKNQGIRILFKGGSRVV YRLSGTGTSGATLRVYIERYEPDPARHDLDTQEALADLIAVADEIAEIKARTGRDQPSVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=558, Percent_Identity=54.3010752688172, Blast_Score=608, Evalue=1e-174, Organism=Homo sapiens, GI290463102, Length=558, Percent_Identity=54.1218637992832, Blast_Score=608, Evalue=1e-174, Organism=Homo sapiens, GI133922562, Length=562, Percent_Identity=48.932384341637, Blast_Score=535, Evalue=1e-152, Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=53.2786885245902, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI239741729, Length=132, Percent_Identity=50.7575757575758, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI239743670, Length=132, Percent_Identity=48.4848484848485, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1786904, Length=426, Percent_Identity=27.4647887323944, Blast_Score=89, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17535441, Length=560, Percent_Identity=50.7142857142857, Blast_Score=543, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6323752, Length=566, Percent_Identity=47.8798586572438, Blast_Score=505, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6322722, Length=570, Percent_Identity=47.0175438596491, Blast_Score=489, Evalue=1e-139, Organism=Drosophila melanogaster, GI17864244, Length=556, Percent_Identity=49.8201438848921, Blast_Score=544, Evalue=1e-155,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 58284; Mature: 58153
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTVSTNPYSDQKPGTSGLRKKVPVFQQKNYAENFIQSIFDSLDGFEGQTLVIGGDGRY CCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC YNREVIQKAIKMAAANGFGRVLVGRGGILSTPAASHVIRKYKAFGGIVLSASHNPGGPTE CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC DFGIKYNVGNGGPAPEKVTDAIFARSKTIDSYRIVDAPDVNLDAEGSHQVDDMTVTVIDP CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECH VADYAELMESLFDFDAIRKLIAGGFRVVFDAMSAVTGPYAKEIIEKRLGAPKGSVMNFIP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEC LPDFGGHHPDPNLVHARALYETMMAPDAPDFGAASDGDGDRNLIIGKSIFVTPSDSLAML CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCEEEE AANAHLAPGYAKGLAGIARSMPTSGAADRVAEKLGIGIYETPTGWKFFGNLLDEGLATIC EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHC GEESAGTGSNHVREKDGLWAVLLWLNILAARKESALEIARKHWATYGRNYYSRHDYEEVD CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHH SDAANSLITALRDKLAALPGTSFGALTVDTADDFSYHDPVDKSVSKNQGIRILFKGGSRV HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEE VYRLSGTGTSGATLRVYIERYEPDPARHDLDTQEALADLIAVADEIAEIKARTGRDQPSV EEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IT CC >Mature Secondary Structure TRTVSTNPYSDQKPGTSGLRKKVPVFQQKNYAENFIQSIFDSLDGFEGQTLVIGGDGRY CCCCCCCCCCCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC YNREVIQKAIKMAAANGFGRVLVGRGGILSTPAASHVIRKYKAFGGIVLSASHNPGGPTE CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC DFGIKYNVGNGGPAPEKVTDAIFARSKTIDSYRIVDAPDVNLDAEGSHQVDDMTVTVIDP CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECH VADYAELMESLFDFDAIRKLIAGGFRVVFDAMSAVTGPYAKEIIEKRLGAPKGSVMNFIP HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEC LPDFGGHHPDPNLVHARALYETMMAPDAPDFGAASDGDGDRNLIIGKSIFVTPSDSLAML CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCEEEE AANAHLAPGYAKGLAGIARSMPTSGAADRVAEKLGIGIYETPTGWKFFGNLLDEGLATIC EECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHC GEESAGTGSNHVREKDGLWAVLLWLNILAARKESALEIARKHWATYGRNYYSRHDYEEVD CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHH SDAANSLITALRDKLAALPGTSFGALTVDTADDFSYHDPVDKSVSKNQGIRILFKGGSRV HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEE VYRLSGTGTSGATLRVYIERYEPDPARHDLDTQEALADLIAVADEIAEIKARTGRDQPSV EEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC IT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]